| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1459 |
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| Symbol | |
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| ID | 8419288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1687865 |
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| End bp | 1689400 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038034 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003198324 |
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| Protein GI | 258405582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.281807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AATTGATCAT TTTTGACACC ACACTGCGAG ACGGAGAGCA ATCCCCTGGC
GCGACCATGA ACCACCACGA AAAGGTGCGT CTGGCCAGGC AATTGGACAA GCTCGGCGTT
GACGTTATCG AGGCGGGATT CCCCGCGTCC AGCCAGGGCG ATTTCGAGGC GGTCCAGGCC
ATCAGTCGCG CGGTGACCAA CTGTCAGGTG GCCGGGCTCT GCCGCTCGGT CCTCTCTGAT
ATCGACCGCG CCTGGGAGGC GCTTCAGGAC GCGCCCAAGG CCCGGATCCA CACTTTTATC
GCCACCTCCG ACATCCATAT GGAACATAAG CTCGGCAAAA GCCGCAGCGA GGTGTTGGAC
ATGGCCCGTA AGGCGGTCAG CCACGCGGCC TCGTATACAT CCAACGTCGA GTTCTCCGCC
GAGGACGCCT CCCGCTCCGA CTGGGATTTT CTGGTCCAGG TGGTTCAGGT GGCTGTGGAT
GCCGGCGCAA CGACAGTGAA CATCCCGGAT ACGGTCGGGT ATTCCCAGCC TCAGGAGTTC
GCGCGTTTGG TCCGGTATCT GCAGGACAAT GTGCCGGCTT TAGGCAATGA GGTCGTGTTG
AGTGTGCACT GCCACAATGA TCTGGGCCTG GCGGTGGCCA ATACCCTGGC AGCGGTCGAG
GCCGGAGCAC GGCAGGCCGA AGTGACCCTG AGCGGCATCG GTGAGCGCGC CGGCAACGCC
TCGGTTGAGG AAGTGGTCAT GAACCTCAAT GTGCGCAAGG ACTACTTCCA GATCGAGACC
GGCGTGCACA CGGAACAGCT CTTTCCCTCC TGCCGGCTGC TCTCGCTGAT CATCGGGCAG
CCCATCCCGC CCTACAAACC GGTTGTCGGC CCCAATGCCT TTGCTCACGA ATCGGGGATC
CACCAGCACG GCATGCTCAA AAATCGCCAG ACGTATGAGA TCATGACCCC GGAATCTGTG
GGCCGCGCCG GCACGGACAT GGTACTGGGC AAGCACTCGG GCAAGGCCGC CATCAAGGCC
CGGCTGGAGG AACTCGGCTA CAGCCTGACG GACGAGCAGC TGGTGACCGT GGTTGAGGCC
ATCAAACGGC TGGCGGACAA GAAAAAACGG CTCTATGTCG AGGATCTGGA GGCCGTGGTC
CTGGAAGAGA TCTACCGCCT GCCGGATAAA TTCAAACTCA ACTACCTGAA TACCGTCTCC
GGGAATATGG CCCTGCCCAC GGCGGCATTG GAATTGACCA TCGACGGTGA GGAGCACCGG
CTCGCGGATT TCGGAGTCGG TCCCATCGAC GCTGTTTTCA ACACCATCGC GAAATTGACC
AAGCGCTCAC CCAAACTGGT GCGCTATTCG GTCAACGCCA TCACCGGCGG AACAGACGCT
CAGGGCGAAG TGACGGTCCG GCTTGAAGAA CATGGCCGCA GCGCGGTCGG CCGCGGCTCG
GATCCGGATG TGATCATGGC CAGTGCCCGG GCCTATCTCA ACGCCTTGAA CCGCTTGGCG
AAAAAGGAGG AAGAAAAGAT ATGCGCCACA CTGTAG
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| Protein sequence | MAEKLIIFDT TLRDGEQSPG ATMNHHEKVR LARQLDKLGV DVIEAGFPAS SQGDFEAVQA
ISRAVTNCQV AGLCRSVLSD IDRAWEALQD APKARIHTFI ATSDIHMEHK LGKSRSEVLD
MARKAVSHAA SYTSNVEFSA EDASRSDWDF LVQVVQVAVD AGATTVNIPD TVGYSQPQEF
ARLVRYLQDN VPALGNEVVL SVHCHNDLGL AVANTLAAVE AGARQAEVTL SGIGERAGNA
SVEEVVMNLN VRKDYFQIET GVHTEQLFPS CRLLSLIIGQ PIPPYKPVVG PNAFAHESGI
HQHGMLKNRQ TYEIMTPESV GRAGTDMVLG KHSGKAAIKA RLEELGYSLT DEQLVTVVEA
IKRLADKKKR LYVEDLEAVV LEEIYRLPDK FKLNYLNTVS GNMALPTAAL ELTIDGEEHR
LADFGVGPID AVFNTIAKLT KRSPKLVRYS VNAITGGTDA QGEVTVRLEE HGRSAVGRGS
DPDVIMASAR AYLNALNRLA KKEEEKICAT L
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