| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1444 |
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| Symbol | greA |
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| ID | 8419273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1675742 |
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| End bp | 1676227 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038019 |
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| Product | transcription elongation factor GreA |
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| Protein accession | YP_003198309 |
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| Protein GI | 258405567 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00276226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0904446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACAA TTCCCATTTC TGTTGAAGGA TTTGAAAAGC TGAAGCAGGA ACTCGAAAAT
CTCAAGAAGG AACGTCCCGA GGTCATCCAA GCCATCAAGG AGGCTCGGGA GGAAGGCGAT
TTGCGCGAGA ATGCCGGCTA TGACGCCGCA CGGGAGCGTC AAGGCATGCT TGAGGCCCGG
ATTACCTACA TTGAATCCCG GCTACCGCAG TGCAATGTCA TCGATCTTGA CACCATGGGC
GGCGACAAGG TCGCCTTCGG GGCCACGGTG GAGATCGAAG ACATGGAGAC TGAGGAAGTC
AAGCGCTATA CCTTGCTCGG TCCGGACGAG GCCAATGTGG ACCAGGGGAG CATCTCAGTA
TTTTCTCCCC TGGCCAAGGC CCTGCTGGGC AAGCGCGTCG GTGACGAAGC CATTGTTAAT
GCCCCGCGCG GGCGGATCGA GTACGAAGTG CTTTCTATTG AATTCAAGGG AAAACAGGAC
AGCTGA
|
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| Protein sequence | MDTIPISVEG FEKLKQELEN LKKERPEVIQ AIKEAREEGD LRENAGYDAA RERQGMLEAR
ITYIESRLPQ CNVIDLDTMG GDKVAFGATV EIEDMETEEV KRYTLLGPDE ANVDQGSISV
FSPLAKALLG KRVGDEAIVN APRGRIEYEV LSIEFKGKQD S
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