| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1423 |
|---|
| Symbol | ribH |
|---|
| ID | 8419252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1653987 |
|---|
| End bp | 1654457 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037998 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_003198288 |
|---|
| Protein GI | 258405546 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0934099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC TACAGACCAT CGAAGGACAC CTCACAGGCC AGGGATTGCG CTTCGGCATC
ATCGCCACCC GGTTCAACGA CTTCATTGTC GACCGGCTCA TCTCCGGGGC CGTGGATTAT
CTGGTCCGCC ACGGCGTTGA CCGGGCTGAT ATAACCCTTA TCCGTCTTCC CGGTGCCTTT
GAAATGCCCC TGGTGGCCAA GCGGATCGCA GCCTCACAAA AATACGACGG CATTATCTGC
CTGGGCGCCA TCATCCGTGG CGCCACCCCC CACTTTGATT TTGTGGCCGC TGAAGCCAGC
AAAGGCTTGG CCCAGGTCGC CCTCGACGCC GAAATACCGG TCGGTTTCGG TATCCTGACC
ACGGATACCC TGGAACAGGC CATTGAGCGC GCCGGGAGCA AGGCCGGCAA CAAGGGCGTG
GAAGCGGCAC AGGCAACCCT TGAAACGGCT CAAGTCATGA GCCAGCTGTA G
|
|---|
| Protein sequence | MQELQTIEGH LTGQGLRFGI IATRFNDFIV DRLISGAVDY LVRHGVDRAD ITLIRLPGAF
EMPLVAKRIA ASQKYDGIIC LGAIIRGATP HFDFVAAEAS KGLAQVALDA EIPVGFGILT
TDTLEQAIER AGSKAGNKGV EAAQATLETA QVMSQL
|
|---|
| |