Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1373 |
Symbol | |
ID | 8419202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1601679 |
End bp | 1603262 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037949 |
Product | L-aspartate oxidase |
Protein accession | YP_003198239 |
Protein GI | 258405497 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.588403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.51908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACC AACGCGTTCG GGTCTCGACC CTGGTCATCG GTTCCGGGAT CGCCGGCTGC ACAGCCGCTC TCCAACTCGC CTACCAGGGT CAGGAGGTCA CCCTCCTCAC GGCCGGCAGT GGCCTGGATG ACGGAAATAC CGCTCTGGCC CAGGGCGGGA TTGTCTACCG TTCCGAGGAC GACGACCCTT CCTACCTTGA GAGCGACATC CTCAAAGCCG GTTGGGATTA CAATTACCGG CGGGCCGTAC GCTACCTCAG CCGCCGTGGG CCGAAGGTGG TTAAAGAATT CCTCCTGGAG CGCATCAAGA TCCCTTTTGA CCGCGACTCA AGCGATGTCT GCCGGCTCGT GCGCGAAGGC GGCCACAGCA AGGCCCGAAT CCTGTATTGC GCCGACTTTA CCGGGCGGGC TATCATGCAG GGGCTCCAGG AGGCCGTCCT GGGAGAGCCG CACATCACCG TATTGACCAA ACGCACGGCC ATTGATCTCC TGACCTCCTA CCACCACAGC GAACGGCTCG AATTCAAGTA CCATCTGGAT AATCAGGCGG TCGGAGCCTA TGTGTATAAC GGCCATACCG GAGAAGTGCA GACCATCCTG GCCGACCACA CCGTCCTGGC CACCGGCGGA CTGGGACAGA TATTCCTGCA CACCACCAAT ACCGCTGCCT CCATCGGTTC TGGCCTGGCC ATGTCCTTCC GGGCCGGGGC CATGACCATG AACACCGAAT TCGTTCAATT CCACCCTACA GCCCTATATC AGCGCGGCGA TTGGCGCTTC CTTATTTCAG AAGCGGTGCG CGGGGAAGGC GCCAGGCTGG TCAACGAAGC TGGGGAACCC TTCATGCAAT GGTATGACGA ACGCGGCGAC CTGGCACCCC GCGACGTGGT CACCCGGGCC ATTGTCGATG AAATGCTGAC CCGGGGGGAG GAATGCGTCT TTCTCGACGC GGCCAACCAT GTCGATCTGG ACCTGAAAGA ACGCTTTCCG ACCATCTACC GCAAATGCCG GTCTGTGGGC ATCGATATCA CCAAAGACCC CATTCCTGTC GTGCCCGCGG CGCACTATTC CTGTGGCGGG GTTCTGGTCA ACATCCACGG TCAAACCACC CTGCCCCGGC TCTATGCCGC TGGCGAATGT ACCTGTACCG GCGTCCACGG CGCCAATCGC CTGGCGAGCA CCTCTCTTCT CGAGGCTTTG CTGTGGGGCT GGAGCGCAGC CCGCGACATC GGCTACAAGA GGCCGTTCCA GAACACGCTG GACCAGCGCT TGGCCGATTC CATCCCGGAC TGGGTCTGTC CGGGCTACAA CCACAACGAA GACCCCGCTC TGATCGCCCA GGACTGGGCA ACCATCCGGA ACACGATGTG GAATTATGTC GGTATCACCC GCACCACGCC GCGGCTCAAA CGCGCTTTTG AGGACCTGCG GGCCCTGAAC AAACGGATTC ATGATTTTTA CCGCGAAACA CCGATCAGCA AACCATTGAT CGATCTTTTC CACGGCTGTC AGGCCGCCTA CGTGGTCACC AACGCGGCGC TACGGAACAA ACAGTCGATC GGGTGTCATT ACCGGCAGGA ATAA
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Protein sequence | MDNQRVRVST LVIGSGIAGC TAALQLAYQG QEVTLLTAGS GLDDGNTALA QGGIVYRSED DDPSYLESDI LKAGWDYNYR RAVRYLSRRG PKVVKEFLLE RIKIPFDRDS SDVCRLVREG GHSKARILYC ADFTGRAIMQ GLQEAVLGEP HITVLTKRTA IDLLTSYHHS ERLEFKYHLD NQAVGAYVYN GHTGEVQTIL ADHTVLATGG LGQIFLHTTN TAASIGSGLA MSFRAGAMTM NTEFVQFHPT ALYQRGDWRF LISEAVRGEG ARLVNEAGEP FMQWYDERGD LAPRDVVTRA IVDEMLTRGE ECVFLDAANH VDLDLKERFP TIYRKCRSVG IDITKDPIPV VPAAHYSCGG VLVNIHGQTT LPRLYAAGEC TCTGVHGANR LASTSLLEAL LWGWSAARDI GYKRPFQNTL DQRLADSIPD WVCPGYNHNE DPALIAQDWA TIRNTMWNYV GITRTTPRLK RAFEDLRALN KRIHDFYRET PISKPLIDLF HGCQAAYVVT NAALRNKQSI GCHYRQE
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