| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1357 |
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| Symbol | |
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| ID | 8419186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1584756 |
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| End bp | 1585787 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037933 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003198223 |
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| Protein GI | 258405481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.752821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.689608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGAAA AATTCACGGT TTCCTTGGAT AAAGTCCTGC GCGTGGAATC TTTGGTCAAG
CACTTCGATA TTTCCGGAGG GCTTCTGGAC CAGTTGCAAT GGGAAAACGG CCGGCTCCGG
CGCCAGTACA CCACGGTCAA GGCGCTCAAT GATGTCGACT TTTCGATTTT TCCCGGAGAA
ACATTCAGTG TGGTCGGTGA AAGCGGATGT GGAAAATCGA CCTTGGGCCG GGCAGTGCTG
GGACTGCACG GACCCAATAG TGGGAAAGTA TTCTACCGCG GAGAACGGAT CGATCACTTG
ACGCCAAAGC AGATGTTGCC CTACCGGCAG AAAATGCAAA TGGTCTTTCA GGATCCCTAC
GCTTCACTTA ATCCCCGAAT GACGGTGCAG CAGATCCTCG AAGAGCCGGT CGTCTTTCAC
AATCCCGGGA TGCGGCCCAA TGAGGTCAAG GATAAAGTCG CCGCAATCAT GCAGCAGGTC
GGGGTCGATC CAGCCTGGTC GTATCGGTAT CCCCACGAAT TTTCCGGCGG TCAGCGCCAA
CGTATCAGCA TCGCCCGTGC GTTGATGGTT GATCCAGAAT TTGTCGTCGC CGACGAACCG
ATTTCAGCCC TGGATGTCTC TATCCAGGCC CAGATCCTGA ATTTGTTGAT GGACGCCCAG
GAACAGCACG GTCTGACATA CCTGTTCATC ACCCATGACC TTTCGGTCGT GGAGCATTTC
AGCACCCGGG TGGCTGTCAT GTATCTGGGG ACGATTTGCG AGCTGGCGCG GACTGAGGAT
CTTTTTTCCC ATCCCCGGCA CCCCTATACC CAAGCCCTGC TCAGCGCCAT TCCGCGTCTG
GGACGCGTCG GGTCTTCCCA TATCAAACTC AAGGGCGAAG TGCCGACGCC GATCCACTTG
CCTTCTGGTT GCGTTTTTCA CGGGCGGTGT CCTCACATGC GTCCAGTCTG TCAGGAGGAA
ATTCCGCGCC TTATTGATCT TGAAAACGGG ACCCGGATTG CCTGCCACGG GGTGGAGCAG
GGCTGGGTGT AA
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| Protein sequence | MREKFTVSLD KVLRVESLVK HFDISGGLLD QLQWENGRLR RQYTTVKALN DVDFSIFPGE
TFSVVGESGC GKSTLGRAVL GLHGPNSGKV FYRGERIDHL TPKQMLPYRQ KMQMVFQDPY
ASLNPRMTVQ QILEEPVVFH NPGMRPNEVK DKVAAIMQQV GVDPAWSYRY PHEFSGGQRQ
RISIARALMV DPEFVVADEP ISALDVSIQA QILNLLMDAQ EQHGLTYLFI THDLSVVEHF
STRVAVMYLG TICELARTED LFSHPRHPYT QALLSAIPRL GRVGSSHIKL KGEVPTPIHL
PSGCVFHGRC PHMRPVCQEE IPRLIDLENG TRIACHGVEQ GWV
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