Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1345 |
Symbol | |
ID | 8419174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1571378 |
End bp | 1572112 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645037921 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003198211 |
Protein GI | 258405469 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.706269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAAAA AATTGCTCTT CACTGTCCTG GCCATTTGTC TTGGCGCTCA AATGGCTGTG GCCAAGGAGA TTGTCTTCGC CGTGGACGCC ACATGGCCAC CGATGGAATT CGTAAACTCG GAAAAAGAGA TTGTCGGGTA TTCCATCGAT TTCATGACCG CCGCGGCTGA AGAAGCCGGA TTTACCCCTG TGTTCAAGAA TGTTGCCTGG GACGGGATCT TCGCCGGATT GGCCGGTGGC AATTATGACG CCATCTGTTC GTCTGTGAGC ATCACCGAGG AACGCAAAGA GGCTATGGAT TTCAGCGAAC CCTATTTCCA GGTCCAGCAG GCCCTTGTCG TTCCGAAAGA CGTTGAGGCC AAAACACTTG AGGATCTTGA GGGCGAGCCT GTCGGCGCCC AGATCGGGAC CACCGGCTAT TTTACTATCA AGGACGACGG TGCCCCGGAA CCCAAGTCGT ACGATGAAAT CGGCCTGGCC ATGCAGGACC TGCTCAACGG CCGTTTGGCA GGCGTGGTCT GCGACGACCC GGTGGCCGCC AATTATGCCA AGCAAGAGGA AGGGTTCTCA GATGCCCTGA AGATCGCGGC CATTTTGGAA TCCGACACCG AAGAGTATTA CGGTATCGCT CTGAAAAAAG GCAATGAAGA CCTGCTCAAG CTGATCAACA AAGGCATCCG GGCAGTCAAG GACAAGGGGC TGGACGCGGA ATTGCGCGCC AAGTGGATCG AATAA
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Protein sequence | MLKKLLFTVL AICLGAQMAV AKEIVFAVDA TWPPMEFVNS EKEIVGYSID FMTAAAEEAG FTPVFKNVAW DGIFAGLAGG NYDAICSSVS ITEERKEAMD FSEPYFQVQQ ALVVPKDVEA KTLEDLEGEP VGAQIGTTGY FTIKDDGAPE PKSYDEIGLA MQDLLNGRLA GVVCDDPVAA NYAKQEEGFS DALKIAAILE SDTEEYYGIA LKKGNEDLLK LINKGIRAVK DKGLDAELRA KWIE
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