| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1321 |
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| Symbol | |
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| ID | 8419150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1546315 |
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| End bp | 1547724 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037897 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_003198187 |
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| Protein GI | 258405445 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR00591] photolyase PhrII |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.533615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0703748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCTCC CCGCTTCCCC AGTTCATGCC CAACGGCTGT ATTGTCACAC TCCCTCGGTC
CGGGGTTCCG GGCCGGTGGC CTATTGGATG AGCCGGGATC AACGCCTGCA CGACAATTGG
GCCCTGCTCC AGGCCCAGCA TATGGCCCGA ACGCGTCAGG CTCCCCTGAT CATCGTTTTC
TGTCTCGTGC CGTCCTACAG CGGGGGCGCC AGACGCCATT TCGATTTCAT GCTCACCGGG
CTGCGCCAGG TGGCCGACTC GGCCGCCAAG CTGGGCATCC CTTTTGTCCT TTTGACCGGA
GAGGACCCCC CGGGGGAACT GGCTGGATTT TGCCGTACCC ATGCGATCGG CACCGTGGTG
ATGGATTTTG ATCCCCTGCG CACCAAGCAG CAGTGGCAGC ATACCTTTGC CGGCCATTGG
GAAGGCGAAT GCCTGGAGGT CGACGCCCAT AACGTGGTTC CTTGCCGATG GGCCTCTGAA
AAGCAGGAGT ATGCCGCCAG GACCATTCGG CCCAAATTGC AACGACAGCT GCCTGAATTT
CTGGATCCGT TTCCCGAACT TGTGCCCCAC CCGGTGCCCT GGCGGGGCAG CCTCTTGCCA
GAGCCGGATT GGGAGGCGGC CTCCCGCTCG CTGGCGGCGC CAGAGTATGG CCCACCGCTG
TCCTGGTCCT CCGGTGAAGA AACTGCCCTG GATCTCGCCC GGGAATTTAT AGCCTCAGGC
CTGAGCGCCT ATGCTGAAAA ACGCAACGAC CCCACTGCTG GCGCGGTGTC CGGTCTGTCC
CCCTATCTCC ATTTCGGCCA GATTGCGCCG CAGCGGGTGG CGCTGATGGC CCGGGACGCG
AACTGGGCTC CCGCCGAGTC CAGGGAGGGG TTTCTCGAGG AATTGGTCAT CCGCCGGGAA
CTGGCTGAGA ATTTCTGCTT TTATAACCCC GTCTACGACT GTTTTGGCGG GCTGCCCGCC
TGGGCCCAGC AGACCCTGGA CGACCACCGT GGGGATCATC GCGAGGTGGT GTATACTTTC
GAGCAGTGGG AAGCGGCCCG CACCCACGAC CCCCTCTGGA ATGCGGCCCA GCAGGAGATG
GTCCAGACCG GAAAAATGCA TGGCTATATG CGGATGTATT GGGCCAAGAA GATCCTGGAA
TGGTCGGCCT CCCCGGAAGA AGCGCTGTCC ACGGCCATCA CTCTGAACGA CCGCTATGAA
CTCGATGGAC GCGATCCCAA CGGCTATACT GGCGTCCTCT GGTCCATCGG GGGCGTTCAC
GACCGGCCGT GGAAGGAACG TCCGGTCTAC GGCAAGGTCC GTTACATGAA CGATCGCGGC
GCAGCACGCA AATTCGACGT CCAGGCCTAT ATCCGGCGAT TTTTTCCGGC CACGGCCTCC
GAGCGTCAGG GCACCCTTCC TCTTGGCTAA
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| Protein sequence | MSLPASPVHA QRLYCHTPSV RGSGPVAYWM SRDQRLHDNW ALLQAQHMAR TRQAPLIIVF
CLVPSYSGGA RRHFDFMLTG LRQVADSAAK LGIPFVLLTG EDPPGELAGF CRTHAIGTVV
MDFDPLRTKQ QWQHTFAGHW EGECLEVDAH NVVPCRWASE KQEYAARTIR PKLQRQLPEF
LDPFPELVPH PVPWRGSLLP EPDWEAASRS LAAPEYGPPL SWSSGEETAL DLAREFIASG
LSAYAEKRND PTAGAVSGLS PYLHFGQIAP QRVALMARDA NWAPAESREG FLEELVIRRE
LAENFCFYNP VYDCFGGLPA WAQQTLDDHR GDHREVVYTF EQWEAARTHD PLWNAAQQEM
VQTGKMHGYM RMYWAKKILE WSASPEEALS TAITLNDRYE LDGRDPNGYT GVLWSIGGVH
DRPWKERPVY GKVRYMNDRG AARKFDVQAY IRRFFPATAS ERQGTLPLG
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