Gene Dret_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1289 
Symbol 
ID8419118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1510994 
End bp1512172 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content61% 
IMG OID645037865 
Productmetallophosphoesterase 
Protein accessionYP_003198155 
Protein GI258405413 
COG category[R] General function prediction only 
COG ID[COG1408] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.322917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTT TGGTCGTTTT TTTCCTTGTC TATTGGCTGA TGCACATCGT CGTTTTTGGT 
CTTTCCGGCC TGCAATTGGG GTTTTCGGCC CGAGCCTGGA GCGCGGCCCT GCCGTTGACC
CTTTTTTTGA GCCTGACGCC GTTGTGGGCA GCCTTGGTGC CGGATTGGCT GCCGCGCTGG
GCGCTGACAT CGATCTGGTG GGCGACGTAT ATCTGGCTCG GGGTCCTTTT TTACCTGTTT
TGCGTCCAAA CAGTATACGC TGTGGGCTGG GTGGCCCTGC ACTGGGGACC GGCTTCCCTG
CAATCTGTTT TCGCACCGCG AGCGGCGTGG TTCTGGGCTG GGGTGGCCCT TGTCTGCCTT
GTTTTGGCCT ACGGCGTGTA TGAGGCCAGG GAGCGTTTCG ACGTGACCCG GCATGAAATC
CCTTTGGCCC AAGCCGCTGC GCCGCTGCGC CTGGTCTTCT TTTCCGATCT CCATCTGGGA
TTGATGCCTT CGTTCGGCCG TCTGGAGGAA CTCGTCCGCC TCTGCGAGCG TATCGAACCG
GACCTGGTCT GTATCGGGGG GGATCTGCTC AACGACCACA CCGGTTTCCT GGAGCGGGAA
CTGGATCTCG TGCGCCGTTT GAGTCGACAA TTTCCCGTTT GGGCAGTCTT GGGCAATCAC
GAGGTCTATT CCGGAGTCGA CGCTTCGCTC GCCTTTTACG AGCAAGCCGG TGTCCGGGTT
TTGCAAAATG CAAGTCGCCT CCTCAACCCC AGTACCCCTT TGCGCGTGAC CGGCGTCAAC
GACCCGGCCT TGGGACAACG GTCCTTGAGC GCACGGCTGT CCCCTGCGCT GGCCGAGGCC
TCGGACAACC CGGGAGAGGA TGTTGTCCAT ATCCTCCTTT CCCACTCTCC CCGGGGATGG
CCCGACGACG TTCCGGAGGA TGTGGACCTC ATGCTCAGCG GCCACACCCA TCGCGGTCAG
ATGTTCCCCT TTTCCTGGGT TGTCCGACTG GCCTATCCGC ATATAAACGG TATATACTCC
GAGGGCAGCC GGCACCTCAT CGTCTCCCGG GGCGCCGGAA CCTGGGGGCC GCCGTTCCGT
GTTCTGGCTC CCCCGGAAGC CCTTGTTCTC GATATTCTAC CCACTGCAGA AGCCGCTGGA
GGCACCGATG GAAAAGCACC TGCTTCTTAC GGTCAGTGA
 
Protein sequence
MWFLVVFFLV YWLMHIVVFG LSGLQLGFSA RAWSAALPLT LFLSLTPLWA ALVPDWLPRW 
ALTSIWWATY IWLGVLFYLF CVQTVYAVGW VALHWGPASL QSVFAPRAAW FWAGVALVCL
VLAYGVYEAR ERFDVTRHEI PLAQAAAPLR LVFFSDLHLG LMPSFGRLEE LVRLCERIEP
DLVCIGGDLL NDHTGFLERE LDLVRRLSRQ FPVWAVLGNH EVYSGVDASL AFYEQAGVRV
LQNASRLLNP STPLRVTGVN DPALGQRSLS ARLSPALAEA SDNPGEDVVH ILLSHSPRGW
PDDVPEDVDL MLSGHTHRGQ MFPFSWVVRL AYPHINGIYS EGSRHLIVSR GAGTWGPPFR
VLAPPEALVL DILPTAEAAG GTDGKAPASY GQ