| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1244 |
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| Symbol | |
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| ID | 8419072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1458981 |
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| End bp | 1459943 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037819 |
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| Product | Patatin |
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| Protein accession | YP_003198110 |
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| Protein GI | 258405368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0438678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAAA TGAGTCGCCG GATGTTTCTC CAACTCTGCT CAGGGCTTGC GGCCAGTGGA
GCCCTTCTGC AGTCCACCAT TGCCCGCGCC GTCGGTACGG GCCCAGACAC CACCCTTTCT
CCGGAGGAAC CGATGTCCGC TCCGAAAACC ATAGGGCTGG CCCTCGGCGC CGGCGGGGCT
AACGGTCTGG CCCATATCCG CATGCTGGAA GTCTTCGACG AACTCGGCAT CCGTCCCCAC
AAAATCGCCG GCAGCAGCAT CGGCGCGATC ATTGGCGCGC TGTACGCCTC TGGACTGAGC
GCCAAGGAAA TCGGCGAGGT GGTCAATGAA TTGGTGGTCC GGGAAGAGGA CACCTGGAAG
GATGTCTTTG TGAACAAGGA CATTTTCAAA TGGATCGAGT TCCTGGATCC GGAACTGGGG
CAGGGCGGTC TGGTCAGTAG CGACGCATTT TTATCGTTTC TTTTCAAGCA GATTCGGGTA
GAGAGCTTCG AAGCTCTGAC CATCCCGCTG GCCGTGGTGG CCACGGATTT CTGGCAGCGG
CGGGCCGTGG TCTTTGACAA GGGACTTTTG CTGTCAGCAG TCCAGGGGAG CATGGCCTTG
CCCGGCCTGT TCACCCCGGT GCGGCGTGAC GGCCTGGTCC TGATCGACGG CGGAGCGGTG
AATCCTGTGC CCTATGATAT TTTGGCCCCA TCGTGCGAGG CCACAATTGC CGTGGACGTG
GCCGGAAAGC GCTCACCCAA GAAAGACTTG TCCTTTCTGG ACACTATCTT CAACACCTTC
CAGATCATGC AGCACTCCAT CGTGGCCGAA AAAACCTCCG CCAATCCCCC GGATATCTCC
ATTGTTCCAG ACATCGTCGA TATAAGGGCC CTGGAATTCT ACAAGGTCGA CACGATCTAC
CGCCAGGCCA AACCCGCCAA AGACCAGCTC AAACGGGAGC TGTCCGCCTT GTTGGAACGC
TGA
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| Protein sequence | MRQMSRRMFL QLCSGLAASG ALLQSTIARA VGTGPDTTLS PEEPMSAPKT IGLALGAGGA
NGLAHIRMLE VFDELGIRPH KIAGSSIGAI IGALYASGLS AKEIGEVVNE LVVREEDTWK
DVFVNKDIFK WIEFLDPELG QGGLVSSDAF LSFLFKQIRV ESFEALTIPL AVVATDFWQR
RAVVFDKGLL LSAVQGSMAL PGLFTPVRRD GLVLIDGGAV NPVPYDILAP SCEATIAVDV
AGKRSPKKDL SFLDTIFNTF QIMQHSIVAE KTSANPPDIS IVPDIVDIRA LEFYKVDTIY
RQAKPAKDQL KRELSALLER
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