| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1221 |
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| Symbol | |
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| ID | 8419049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1431021 |
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| End bp | 1433609 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645037796 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003198087 |
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| Protein GI | 258405345 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000508764 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC AAAAAAATTC CAGCGCGTTT TTCAAGCAAT CCCTAGGGGT CCGATCACGT
TTTTTACTCG GTACTGCCTT GGCTTTGATC CTGTTTTGTT TTCTCGCGGT CTTTTTCCTG
TACAACCGCG AAGAGGCACA GCTCAAAGAA CAGGCGTACG CAAAAACACA ATTGGTCATG
GCCGCTGTAG AGGCCAGCCG CCACTATGTC CGCGAAGAAC TCCGGCCCGC CATGTACGAG
CGGTTCGGGA AGGACTTTTT TTTACTCCCA GCCATGTCCA CCTCGTACGC GAGCCGGTCC
ATCATGGATC TGTTCAATCA GGAACTGCCG CAATACGAGT ACCGGCGAGT GGCGGTGAAT
GCCCGCAACC CTGACTCGGA AGCAAACATG TTGGAAGTAG GGATGATCAA GCGGTTCCGC
CGCAATCCGG AACTGAAGAA TTGGCAGGGG GTCATGACCG TTACAGGTGA CAAACAGTTT
ATGCGCTTTA AGCCTGTGTA TTTTCAACAG TCCTGCATGA CCTGTCACGG AAAACCTGAA
GATGCCCCCC AGGAATTGGT GGAACGCTAT GGGAATCAAA GGGGGTTCGG TCATCAAGCT
GGAGAATTAG CTGGGGTTGT GGCCGTTGGC ATACCGGTAC AAAAAGCCTT TTCCGTCATA
CAAAACCAGG CCACAACAAC ATTTTTGTTT CTTTTTATCG GCGCCTCGCT TTTCTACGCT
GCACTGGCCT GGATCTTTAA TCAGGTCGTG GTTAACAATC TCCGGGGCGT TCTGCATATT
TTCCGAGGAG AAGTTGAAGA CAAACGTCTG CAGGATTTTC TGCCCCCGAT TGACCCGGAC
AAGCCACGTG ATGAATTTCA GGAATTAACA GAAGCCGCGG TGACCATGTC GGAGCATTTG
CGACATACCA AGCAGGAACT CAAAAACCAC GCCCAGAATC TCGAAAAGAC AGTAGCGCGC
CGGACCAAGG CTCTGGAGCA CTCCCAGCAG TTGCTGGAAC AAAAGGTCAT GGCCCGCAAT
CAGGAATTGG GCGCTTTGAA TCGGATTTCT GAACTGACCA CACGAGCAGA AGGTGTCCAT
GATGTCTGGC AACGGGTGCT GGCTCAGACC CTGGACCTTA TTCCGGCCCA TGGCGCGGGC
GTTTATCTCT TGGACCAGAA CCAGGATGTT TTGGTCCTGC GGTATGCCTA TAACGCGGGC
GCGCTGCCCG AAGAAGTGGC CAATTCCTGT TCTGTTTCCG AGCATTCGTC CCGGGACAAT
GAACAATTCA AGGCCTCTAT CACGCGCGCC TTACGTGCTG AACTGTGCAG TACCGTGACG
CTTGCTCCAG AGGTGTCCTG CTCCAACATT CCCATTTCCT GCCGTGGCCG GGTCCTGGGG
GTCATGAGTT TTATCCATAA GGACCCTGTG GACATTAATG AGGAACAAAA AGAGCTGCTT
CTGTCCATAG GGCGGCAGAT AGGAATCGCT GTGGAGAGCC TGAGGGATAT GCACCTCTTA
TTGCATAATA AAGAGTTGCT CCAGACTGTT TTTGACGGTA TCACCGACCA ACTGGTCCTT
CTCGATCGCG ATTTGCGGGT CCAAATGGTC AATCAGGCCT ATTTGCGCCG ATACAATGTC
ACCCTTTCTG ACGTTCTCCA TCGGCCTTGT TATGAGATCC ATGCGGGATT GGATGATATC
TGTCCAGATT GCAGCTTGCC GCAAGTATTA GAAGATAAAA AGCCCAGTAG CAGGGAGGTA
GAAACATCAA GCGGTGAAAT TTTCTTGCTC CACTTTTATC CTATTGTGAA TGAGGACGGT
GAAGTGGAAA ATATTATTCG CTATACTCAT GAAATAACTG AGCAGAAAAA AATGGATCAG
AAAATACAGC AGACGGAAAA AATGGTTGCT CTGGGACAGG TGTCCTCGGG AATCGCCCAT
GAGATCAATA ATCCGCTGGG CATTATACTG TGTTACACTG ATCTTTTGAA GCGGCAACTC
AAAGAGAGCC CTCAAGCTGT CACCGATGTC GATGTCATCG AACAACAAGC CCGGAATTGC
AAGAAAATCG TCACTGATCT TCTGCAATTT TCAAAAAAAC AAGAAAGCCC TAAGAGTCCT
GAACAAATCA ATGCCATTAT TCAAAATGTC GCTCAGATTT TACGGCACCA ATTGCATAAA
AATGGCATCG ATTTCCATTT GCAATTAGAT CCCACTCTGC CGCTTGTTGT GGTCAGCGCG
GACAAAATCC AACAGGTAGT GGTCAACTTG GTGCTCAACG CCATGCAGGC TGTAGGAGAA
CAGGGGCGTA TCGTGGTCGA ATCATTTGTC CAGGAGGAAG GCAGGAGGGT GGCCTTGGCC
GTCTGGGACA ACGGTCCCGG GGTTGAGAGC AGTATTCGTC AAAAAATTTT CGACCCCTTT
TACAGCACGA AGCGGGTCGG TGAAGGCACG GGGCTTGGAT TGTCGGTCAG TTATGGTATC
ATCCAGGACC ACGGTGGGGA AATCACTTTG GAAAGCGAAC AAGGGCAGTG GACCCGGTTC
ATCGTCAGTC TCCCCCTTGA AGCATCACTC AATGTCGCTC AGGACACCAC CAGACCAAGC
GGAGAGTGA
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| Protein sequence | MTAQKNSSAF FKQSLGVRSR FLLGTALALI LFCFLAVFFL YNREEAQLKE QAYAKTQLVM
AAVEASRHYV REELRPAMYE RFGKDFFLLP AMSTSYASRS IMDLFNQELP QYEYRRVAVN
ARNPDSEANM LEVGMIKRFR RNPELKNWQG VMTVTGDKQF MRFKPVYFQQ SCMTCHGKPE
DAPQELVERY GNQRGFGHQA GELAGVVAVG IPVQKAFSVI QNQATTTFLF LFIGASLFYA
ALAWIFNQVV VNNLRGVLHI FRGEVEDKRL QDFLPPIDPD KPRDEFQELT EAAVTMSEHL
RHTKQELKNH AQNLEKTVAR RTKALEHSQQ LLEQKVMARN QELGALNRIS ELTTRAEGVH
DVWQRVLAQT LDLIPAHGAG VYLLDQNQDV LVLRYAYNAG ALPEEVANSC SVSEHSSRDN
EQFKASITRA LRAELCSTVT LAPEVSCSNI PISCRGRVLG VMSFIHKDPV DINEEQKELL
LSIGRQIGIA VESLRDMHLL LHNKELLQTV FDGITDQLVL LDRDLRVQMV NQAYLRRYNV
TLSDVLHRPC YEIHAGLDDI CPDCSLPQVL EDKKPSSREV ETSSGEIFLL HFYPIVNEDG
EVENIIRYTH EITEQKKMDQ KIQQTEKMVA LGQVSSGIAH EINNPLGIIL CYTDLLKRQL
KESPQAVTDV DVIEQQARNC KKIVTDLLQF SKKQESPKSP EQINAIIQNV AQILRHQLHK
NGIDFHLQLD PTLPLVVVSA DKIQQVVVNL VLNAMQAVGE QGRIVVESFV QEEGRRVALA
VWDNGPGVES SIRQKIFDPF YSTKRVGEGT GLGLSVSYGI IQDHGGEITL ESEQGQWTRF
IVSLPLEASL NVAQDTTRPS GE
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