| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1206 |
|---|
| Symbol | |
|---|
| ID | 8419034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1417871 |
|---|
| End bp | 1418866 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037781 |
|---|
| Product | protein of unknown function DUF1611 |
|---|
| Protein accession | YP_003198072 |
|---|
| Protein GI | 258405330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3367] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.356367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGT CACCTTATCT GCTTTTCCTG GGCGACGCTC CGGACATGCT GGCCGCGAAA
GTGGCGCAGG GCATCCAGGA TTGGCGACCG GAAATGGCCG TGGGCCAATA CCGTATGGAG
GGTTGCGGTG CTGATCTAGG CATACAGGAC ATGTCCATTG CCGACGCCGT GGCTGCCGGT
GCCCAAACTC TGGTCATCGG TGTGGCCAAC CGCGGCGGTA TTATCTCCCA GGCCTGGAAA
TCGGTGCTTA TCGAAGCCTT GGAGGCAGGG ATGGATATCG CTTCCGGGTT GCACAATCTG
CTCCGCGACG AACCGGATCT GGTCGCTGCT GCGGATGCCA CCGGACAGAC CCTCCACGAT
GTCCGCGTAC CGCCCATCAC CTATCCCATT GCCAACGGTA AAAAACGCAC CGGGAAACGG
TGCTTGGCCG TGGGCACGGA CTGCTCGGTG GGCAAGATGT ACACCGCTCT TGCCCTGGAC
TGGGAAATGA AGAACCAAGG CAAGAAGTCC TCGTTTCGGG CCACTGGACA GTCCGGGATC
CTCATCACCG GTGACGGCGT CCCTCTGGAT GCGGTCATCG CCGATTTTAT GGCTGGGTCC
ATTGAATATC TGACCCCGGA CAACGACCCT GATCATTGGG ACATCATTGA GGGGCAGGGC
AGTTTGTTCC ACGCGTCCTA TTCCGGTGTC ACCCTGGCCC TTATCCACGG CGGACAACCC
GACGCCCTTA TCCTCTGCCA CGAACCAACC CGAGAGCACA TGCGCGGATT GCCGGGTTAC
CAGCAACCCT CCCTCGAGGA ACTGCGCGAC ATGTCTTTGG CCCTGGCGCG CGTGGTCAAT
CCCGGCTGTG AAGTGGTGGG CATCTCGATC AACACCCAGC ATCTGAGCGA CGCCGACGCT
TCGGCCTATC TCAATGAGGT GGAAAAACAG ATGGGACTGC CGGCTGTGGA CCCCTTCCGG
CATGGCGCAA CCCGTCTTGC CGAGGCCTTG TCGTGA
|
|---|
| Protein sequence | MIQSPYLLFL GDAPDMLAAK VAQGIQDWRP EMAVGQYRME GCGADLGIQD MSIADAVAAG
AQTLVIGVAN RGGIISQAWK SVLIEALEAG MDIASGLHNL LRDEPDLVAA ADATGQTLHD
VRVPPITYPI ANGKKRTGKR CLAVGTDCSV GKMYTALALD WEMKNQGKKS SFRATGQSGI
LITGDGVPLD AVIADFMAGS IEYLTPDNDP DHWDIIEGQG SLFHASYSGV TLALIHGGQP
DALILCHEPT REHMRGLPGY QQPSLEELRD MSLALARVVN PGCEVVGISI NTQHLSDADA
SAYLNEVEKQ MGLPAVDPFR HGATRLAEAL S
|
|---|
| |