Gene Dret_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1202 
Symbol 
ID8419030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1414109 
End bp1414576 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content60% 
IMG OID645037777 
ProductPEBP family protein 
Protein accessionYP_003198068 
Protein GI258405326 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT ATTCCGATGC CTTTACCGAT CAGACCACAA TTCCGGTCAA ATATGCCATG 
CCGGGCGCCG GTGGGCAGAA TATCTCCATT CCTTACCGCT GGGAGGGGGT GCCGCAGGGA
ACGCAGTCTC TGGCCTTGTC CCTCATCGAT CCCCATCCTG TGGCGAACAA CTGGATCCAT
TGGCTGGTGT TGAACATCCC CGCCTCGATC ACCTCGCTGC CGGAAGGGGC CTCAGGCAAT
ACCATGCCCG AGGGCAGTCT GGAATTGACC AATTCCTTCG GCCGTATCGG CTATGGCGGT
CCCCAGCCCC CCGCGGGCAG TGGCGAACAC CCCTATGTGG CCACATTGTA CGCTTTGGAT
GCGGCCTCGG TGGCCTTGGC GCAAACGGCC ACGCTGCAAC AATTTGCCGA AACAGTGGAC
AGCCTGGTTC TGGCGCAGGC GACGTATACC GGGGTTTTTG AGCGCTAG
 
Protein sequence
MRLYSDAFTD QTTIPVKYAM PGAGGQNISI PYRWEGVPQG TQSLALSLID PHPVANNWIH 
WLVLNIPASI TSLPEGASGN TMPEGSLELT NSFGRIGYGG PQPPAGSGEH PYVATLYALD
AASVALAQTA TLQQFAETVD SLVLAQATYT GVFER