| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1172 |
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| Symbol | |
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| ID | 8419000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1376346 |
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| End bp | 1376516 |
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| Gene Length | 171 bp |
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| Protein Length | 56 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645037747 |
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| Product | Flp/Fap pilin component |
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| Protein accession | YP_003198038 |
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| Protein GI | 258405296 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000321747 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGC TGATGAACTT TTTCAGGGCT GAGGAAGGGG CAACCGCTGT AGAGTACGGC
TTAATGGTTG CTTTGATCGC GATTGTTATT ATTGCTGCTG TTACTTTCTT GGGCAACTCT
TTAAATAATA TTTTCAATGA AGTCGCCAAT AAAGTTGATA GCGCGGGATA A
|
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| Protein sequence | MDKLMNFFRA EEGATAVEYG LMVALIAIVI IAAVTFLGNS LNNIFNEVAN KVDSAG
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