Gene Dret_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1171 
Symbol 
ID8418999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1376079 
End bp1376249 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content43% 
IMG OID645037746 
ProductFlp/Fap pilin component 
Protein accessionYP_003198037 
Protein GI258405295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000265809 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG GACTATTTAC TTTTTTTTTC GACGAACAAG GCGCGACAGC GACCGAATAC 
GCTATCATGA TTTCACTTAT TGCTGTTGTG ATTATAGTTG CCGTCACTGC CCTGGGGCTA
GCTACCAACG ATTTGTTTTC TGAAGCCAAG AACGAATTCG AAAAACTCTA G
 
Protein sequence
MLNGLFTFFF DEQGATATEY AIMISLIAVV IIVAVTALGL ATNDLFSEAK NEFEKL