| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1135 |
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| Symbol | |
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| ID | 8418962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1331545 |
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| End bp | 1332441 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037709 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003198001 |
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| Protein GI | 258405259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.433507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAT ACATCCTTCA CCTCGCCGTT CTGGGCGGCA TGTACGTCCT GCTGGCCGCC
AGTCTGAACA TCCCGGTCGG GCTTTCCGGA CAGGTCTCCC TGGGCCACGG CGCGTTTTTC
GGCATCGGGG CCTACATCTC CGGACTGTTG GCCATGCATT ATACCATTGT GCCCTTTCCG
CTCCTGCTGG TCCTGGCCGG TCTTGGCAGC GCGGCCGTTG CGGTTTTGCT CAGCCCTCCG
GCTCTGAAAC TCAAAGACGA ATATCTGGCC GTCGTGACCC TTGGCTTTGG GCTCATCTTT
GAACTCGGCC TGAAAAACCT CGCCTTCACC GGAGGCACGG ACGGCCTCTA CGGTCTGCCG
AATTTCGGTA TGCAGGGCGC GGATTTTCTC TGGTGGGTCT GGGGCGCGGT CACCCTCTGT
CTTTTTGTCA CCTCACGGCT ACGTAAGGGA CAATTCGGAC GCAATCTGAC CGCGATCAAG
GAATCCGAGC GGACCGCCAG GACATTGGGC ATCGCCCCGC TGCCGCTCAA GGTCGGGTGT
TTCGCCCTCT CGGCCTTGTT TGCCGGTATT GCCGGCAGCC TCTACGCCCA CTACATCACC
TTCATCAATC CCGGTGTGTT CGGCCTGCAC ACTTCGATTT TACTGTTGTG CATGGTCGTT
CTCGGCGGCA TGGGCACTGT GCTTGGCCCT CTGGCCGGGG GCATTTTGCT CTTTTTGCTC
CCGGAGTTGC TCCAGGAATT CGCCGATTAC CAGGATCTCG TTTACGGCGG CCTGTTGATC
GTCATCCTTA TCTTCCGCCC TCAGGGGCTC CTCGGACGCG CTCCCGGCCA GGGCCGCCGC
CGTTTCCCGC TGCGGCGCCG GACCCAATCG GCACCCGCAT CAACCTCCAA TGCGTGA
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| Protein sequence | MAAYILHLAV LGGMYVLLAA SLNIPVGLSG QVSLGHGAFF GIGAYISGLL AMHYTIVPFP
LLLVLAGLGS AAVAVLLSPP ALKLKDEYLA VVTLGFGLIF ELGLKNLAFT GGTDGLYGLP
NFGMQGADFL WWVWGAVTLC LFVTSRLRKG QFGRNLTAIK ESERTARTLG IAPLPLKVGC
FALSALFAGI AGSLYAHYIT FINPGVFGLH TSILLLCMVV LGGMGTVLGP LAGGILLFLL
PELLQEFADY QDLVYGGLLI VILIFRPQGL LGRAPGQGRR RFPLRRRTQS APASTSNA
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