| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1107 |
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| Symbol | |
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| ID | 8418932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1299650 |
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| End bp | 1300594 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037679 |
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| Product | aminotransferase class IV |
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| Protein accession | YP_003197973 |
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| Protein GI | 258405231 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0639089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0333795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCGCA CCATCTCAGA CCAGAGCTAT CTTGAGGCCC TTTTGGCAGC CCCCCGGCCG
GGAATCGATC AGGTACGGGC TTTCTATGAC CACCGCGTCG GTGTGATCGG GAAGGATCCC
CGGTATCTGC TTATTCCCAT GGATGACCAC TTGGTCCATC GGGGCGACGG GGTCTTCGAA
ACCCTGAAAT TTACTGCGAA GCGGTTGTAC CAACTTGATG CCCATGTCGA GCGCCTCTTC
CATTCCGCTA AGACCATCGC CATCCATCCT CCGTGTTCGC GAGAGGACGT TCGGGAGTTG
ATCATAGACC TTGCCGCGGC TTCAGAACTC GAAAACGGTA TCGTGGCTGT GTACGTGGGG
CGCGGCCCCG GCGGGTTTTC CGCAGATTTC CGGGAATGCC CCCAGCCCAG CCTGTACGGC
GTGGCCCGGA TCATGCCAGA GCGCCCGGAA GAGCTTTGGG AAAAGGGAGT GACCGCGTAC
ACGACCAGTT TCCCGGCCAA ACAATGCTAT CTGTCGCGGA TCAAGACCGT TGATTATCTC
CCCAATGTGC TCATGAAGCG TGAGGCCGTG CTCAAGGGAT ACGATTACCC CCTGTGTTTC
GACGAACAAG GGTTTTTGGC CGAAGGAGCC ACGGAAAATG TCTGCCTGGT CAATGCCTCG
GGCGAATTGA TCGTCCCGGA ATTGCGCAAT GCTTTACCTG GTACGACTCT ATTGCGCGGC
CTGGATCTCA TCCGACCGGA ACTGCCGGTT GAACACCGTT TAGTGAAAGA GGATGAACTC
TATCAGGCCA AGGAACTCAT TTTGCTGGGC ACCTCGTTGG ATGCCATCAG TGTGGTCCGT
TTTAACGGCC GGCCGATCCA CGATGTCCGG CCCGGACCGG TCAGCCGCCG TTTGCGGCAG
TTGTTGCGGG AAGACCAAGA GCGCAACGGG ACACCGATTC ATTGA
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| Protein sequence | MPRTISDQSY LEALLAAPRP GIDQVRAFYD HRVGVIGKDP RYLLIPMDDH LVHRGDGVFE
TLKFTAKRLY QLDAHVERLF HSAKTIAIHP PCSREDVREL IIDLAAASEL ENGIVAVYVG
RGPGGFSADF RECPQPSLYG VARIMPERPE ELWEKGVTAY TTSFPAKQCY LSRIKTVDYL
PNVLMKREAV LKGYDYPLCF DEQGFLAEGA TENVCLVNAS GELIVPELRN ALPGTTLLRG
LDLIRPELPV EHRLVKEDEL YQAKELILLG TSLDAISVVR FNGRPIHDVR PGPVSRRLRQ
LLREDQERNG TPIH
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