| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1086 |
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| Symbol | |
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| ID | 8418911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1276218 |
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| End bp | 1277213 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037658 |
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| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
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| Protein accession | YP_003197952 |
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| Protein GI | 258405210 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.163368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0103099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGTTG TTACTGGTGG TGCTGGTTTT ATCGGGAGTG CCTTTGTCTG GCAACTCAAC
CAAATGGGAA TCAGGGATAT TCTGGTGGTC GACAACCTGG CCTGCAGTGA AAAGTGGAAA
AATCTGGTCA ATCTTGATTA TCAGGATTAC CTGCACCGGG ACGCCTATCT GGAGAAGGTC
CGCATGGACC GGTTGCCTGC GCCACGGGCC ATTATCCACA TGGGGGCCTG TTCGTCGACC
ACGGAGCGGG ACGCCGATTT CCTCATGGAA AACAATTACC GCTACAGCAA GATTCTCGCC
GAGTACGCCA TGAAGCATGG CGCCCGGTTT ATTTACGCTT CGAGCGCGGC CACCTATGGC
GACGGCCAGT TGGGGTTTGA TGACGATCTG CGTCTGGCGC CGCAACTCAA GCCGTTGAAC
ATGTATGGGT ATTCCAAACA GCTCTTTGAT CTCTGGGTTA TGCGCAATGG CCTGCTCGAC
CGACTCTGTG GCCTGAAATT TTTCAATGTT TTCGGTCCGA ACGAATACCA TAAGCAGGAT
ATGCGCAGTG TGGTCTGCAA GGCCTTCAAT CAGGTGCACG ACCACGGCCG CATCCGCCTT
TTCAAATCCT ACCACCCGGA ATACGAGCAC GGCGAACAGC ACCGCGATTT CGTCTATGTC
AAAGATTGTG TGGCGGTCAT GGCTTGGCTT TTGGACCATC CCGGGGTCAA TGGCATCTAC
AATGTCGGCA CCGGCACGTC CCGGACCTGG AACGACCTCG CCCGTGCCGT GTTCATGGCC
ATGGGGCAGT CCGAACGCAT AGAATACATG GAGATGCCGG AGTCGTTGCA GGCCAAATAC
CAGTACTATA CTCAGGCCCG CATGGAGCGC TTGGCCCGAG CCGGGTGCCC GGTGCGCATG
CGTTCCCTCG AAGACGGCGT TGCTGATTAC ATCGCGCATC TGCAGGCCTC TGATCCCTAC
CTCGAGCCTG AGACCCGGGC CGGAGCCGCC GAATAA
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| Protein sequence | MIVVTGGAGF IGSAFVWQLN QMGIRDILVV DNLACSEKWK NLVNLDYQDY LHRDAYLEKV
RMDRLPAPRA IIHMGACSST TERDADFLME NNYRYSKILA EYAMKHGARF IYASSAATYG
DGQLGFDDDL RLAPQLKPLN MYGYSKQLFD LWVMRNGLLD RLCGLKFFNV FGPNEYHKQD
MRSVVCKAFN QVHDHGRIRL FKSYHPEYEH GEQHRDFVYV KDCVAVMAWL LDHPGVNGIY
NVGTGTSRTW NDLARAVFMA MGQSERIEYM EMPESLQAKY QYYTQARMER LARAGCPVRM
RSLEDGVADY IAHLQASDPY LEPETRAGAA E
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