| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1082 |
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| Symbol | |
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| ID | 8418907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1272984 |
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| End bp | 1274093 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037654 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_003197948 |
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| Protein GI | 258405206 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.248799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.102661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA AGGACTATTA TGAAATCCTC GGCGTCGGCC GCGACGCTTC TGACGAGGAG
ATCAAGAAAG CCTATCGGAA GATAGCCTTC CAATACCATC CCGATCGGAA TCCGGATGAC
CCCGACGCTG AATACCGGTT CAAGGAAGCG GCCGAGGCCT ATGAAGTGCT TCGTGACACG
GACAAGCGAG CCCGCTACGA CCAGTTCGGG CACGACGGGG TCAACGGCAA CGGTGGATTT
CAGAATTTCC AGGATGCCGA AGACATCTTC AGCGCGTTTT CCGATATTTT CGGTGATCTT
TTCGGTTTCA GTTCCGGAGG CAGCCGGCGT GGTCCGCGTC CGACGGCCGG GGCGGATTTA
CGGTACAATC TGGAAGTCTC GTTTCACGAC GCGGCCAAGG GCACTGAAGT CGACCTCCAA
ATCCCCAAGC GTGTGCCGTG CTCAGAGTGT GACGGCAGCG GTTCTGAACC CGGGCACACC
CCGGAAACCT GCCAGCATTG CGGCGGGCGC GGCCAAGTCC AGCAAACGCA GGGATTTTTC
CGCATTGCCA CCCCATGTCC CGTCTGCCGC GGTGAAGGTC AGGTCATTAC CCATCCTTGT
CCCAAGTGCA AGGGCCGCGG GGCCGTCAAA GAGACCCGGA ACATCAAAGT CCGCATTCCC
GCCGGCGTGG ACAATGGCAG CCGGTTGCGT TTGCGCGGCG AGGGCGAGCC CGGTGAGCAT
GGCGGTCCTG CCGGGGATCT GTTTGTGGTC ATCTATGTCC AGGAAGACGA GATGTTCCAG
CGGCAAGGGC AGGACCTGCT TTTAAATGCT GAAATTTCGT TTGTTCAGGC CGCCCTTGGC
GATCGTATCG AAGTCCCGAC CCTGGATGAA CCGGTACAGA TGGATATCCC CAAAGGAACG
CAAAGCGGCG AGTCGTTCCG GATGAAAGGA CTCGGTCTGC CCCATCCAGG AAGCAGTAAG
GTCGGTGACC TCCACGTGAC GATCCAGGTC AAGACGCCGA CAAAATTGAC GAAACGCCAG
GAAGAACTCC TGGAAGAGTT CGCCAAGCTC GAAGAAGAGC GTCCACGGAC CCGGGTCCGC
AATTTCTTTA AAAAGGCCAT GGGAGACTGA
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| Protein sequence | MSKKDYYEIL GVGRDASDEE IKKAYRKIAF QYHPDRNPDD PDAEYRFKEA AEAYEVLRDT
DKRARYDQFG HDGVNGNGGF QNFQDAEDIF SAFSDIFGDL FGFSSGGSRR GPRPTAGADL
RYNLEVSFHD AAKGTEVDLQ IPKRVPCSEC DGSGSEPGHT PETCQHCGGR GQVQQTQGFF
RIATPCPVCR GEGQVITHPC PKCKGRGAVK ETRNIKVRIP AGVDNGSRLR LRGEGEPGEH
GGPAGDLFVV IYVQEDEMFQ RQGQDLLLNA EISFVQAALG DRIEVPTLDE PVQMDIPKGT
QSGESFRMKG LGLPHPGSSK VGDLHVTIQV KTPTKLTKRQ EELLEEFAKL EEERPRTRVR
NFFKKAMGD
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