Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1067 |
Symbol | frdB |
ID | 8418892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1258035 |
End bp | 1258814 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037639 |
Product | fumarate reductase iron-sulfur subunit |
Protein accession | YP_003197933 |
Protein GI | 258405191 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.446689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.284622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA TCCTTCAAAT CGATGTCTTT CGGCATAACC CCGCCGATCC TGGGTCTTCG CCTCGGATGC AGACATTTTA CGTTGACGAG ACCGAGAGCA TGACCCTGTT TATCGCTTTG AACCGTATCC GCGAGGAACA CGATCCGTCG TTGCAATTCG ATTTTTGCTG CCGCGCCGGT GTCTGCGGCT CCTGCGGCAT GGTTATCAAC GGCCGGCCGG GGCTGGCCTG CCACACCAAA ACCCAGGATT TGCCCAAGCA GATTGTTCTG CTGCCACTCC CCGTCTTCCA ACTCATCGGG GATTTGTCGG TGGACACCGG GACGTGGTTT CGCGACATGC ACGAACGGGT AGAATCCTGG ATCCATACTG ACAGCGAGTT TGATCCGGAA GCGCTGGAAG AGCCTATGGA TAATGCTGTT GCTGAGACCG TCTTTGAATT GGACCGCTGC ATTGAATGCG GCTGCTGTAT CGCTGCCTGC GCCACAGCGC GGATGCGGCC GGATTTTCTC GGCGCTGCCG GACTCAATCG CATCGCCCGC TTTGTCATGG ACCCCCGGGA CGAGCGAACA GATGACGCCT TTTATGAATT GATTGGCACC GATGAAGGAA TCTTTGGATG TATGGGCCTG CTGGCCTGCG ACGACGTCTG TCCCAAAGGG TTGTCGCTAC AGACCCAATT GGCGTTTGTG CGCCGTAAGA TGGGCTGGAC GGGCTTGAAA CAGCTCCTGC CGAATTGGAG AAGGGGCAAG CGGAGGGCGC ATGCGCGAGA TCGCGGCTGA
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Protein sequence | MARILQIDVF RHNPADPGSS PRMQTFYVDE TESMTLFIAL NRIREEHDPS LQFDFCCRAG VCGSCGMVIN GRPGLACHTK TQDLPKQIVL LPLPVFQLIG DLSVDTGTWF RDMHERVESW IHTDSEFDPE ALEEPMDNAV AETVFELDRC IECGCCIAAC ATARMRPDFL GAAGLNRIAR FVMDPRDERT DDAFYELIGT DEGIFGCMGL LACDDVCPKG LSLQTQLAFV RRKMGWTGLK QLLPNWRRGK RRAHARDRG
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