| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1007 |
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| Symbol | |
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| ID | 8418829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1180590 |
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| End bp | 1181699 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037576 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003197873 |
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| Protein GI | 258405131 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0379726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGGGCCT CCCCGCCGCA TGCCATAACC GCACGTGACT TACGAACCAT TGGAAATGCC
ATGTCTGAAC GAATGACGCC CGAGGCGGCG CAACGCCTGT GGGATTCGCA CGATCTTTTT
GAACTGGGGC GTATGGCCCA TGACCGCCGT TGGGCCCTCC ATCCAGACCC GACTGTGACG
TATATCGTCG ACAGAAATAT CAACTACACC AATATATGTG TGTCTGGGTG TAAGTTCTGT
GCCTTTTTTC GCCCCCCTGG CCATAGCCAG GGATTTGTCC TCAGTCTCGC GCAACTCGAG
CAGAAAGTCC AAGAGACCGT GGATGTCGGC GGCTACCAGA TTCTGTTGCA GGGGGGCATG
CACCCCGACT TGCCGCTGGC CTTTTACCAA GACATGCTGG GGTTTCTGAA GCAACGCTTT
CCCCAGGTGG CAGTCCACGG CTTTTCTCCG CCGGAAATCT GGTTCCTGGC CGAAAATGAA
GGCCGCTCTC TAACTGAGAT TGTCGCTGAA CTCAAGCAGG CCGGGCTTGA TTCCATTCCC
GGGGGCGGCG CGGAGATCCT GACCGACCGC ATGCGCAACG AGGTTTCCCC CAATAAGTGT
TCGGCGGCGC AATGGCTGGC GGTTATGGAA GAGGCGCACA ATCAGGGACT GCAGACCACC
GCAACCATGA TGTTCGGACA GGGGGAGCGG TTTGACGAGC GGTTGGAACA TCTGGAAGCG
CTTCGGGCGC TGCAGGACCG GACCCATGGT TTCACCGCGT TTATCCCGTG GACCTTCCAG
CCCCGCAATA CCCAGATCCA CCGCACCGAG ACCTCCTCTC ACGAGTATCT CAAATTCCTG
GCCCTGGCCC GTTTGTACCT GGATAATATT CCCAATATCC AGGCCTCATG GGTCACGCAG
GGACCGCTTA TAGGGCAATT GGCCCTGTTT TGGGGCGCCA ATGATTTTGG ATCGACCATG
ATTGAAGAAA ATGTGGTTGC TGCGGCTGGG GTCCATTTTC GTCTGCCGGA AACAACGATC
CGGAATATTG TTGAACGAGC CGGGTTTGTC CCGCGCCGGC GGCGCATGGA TTACACCCTG
TTAACCGAGG ACATCCCCGC TGAAAGGTAG
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| Protein sequence | MRASPPHAIT ARDLRTIGNA MSERMTPEAA QRLWDSHDLF ELGRMAHDRR WALHPDPTVT
YIVDRNINYT NICVSGCKFC AFFRPPGHSQ GFVLSLAQLE QKVQETVDVG GYQILLQGGM
HPDLPLAFYQ DMLGFLKQRF PQVAVHGFSP PEIWFLAENE GRSLTEIVAE LKQAGLDSIP
GGGAEILTDR MRNEVSPNKC SAAQWLAVME EAHNQGLQTT ATMMFGQGER FDERLEHLEA
LRALQDRTHG FTAFIPWTFQ PRNTQIHRTE TSSHEYLKFL ALARLYLDNI PNIQASWVTQ
GPLIGQLALF WGANDFGSTM IEENVVAAAG VHFRLPETTI RNIVERAGFV PRRRRMDYTL
LTEDIPAER
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