| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0994 |
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| Symbol | |
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| ID | 8418816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1168050 |
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| End bp | 1168781 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037563 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_003197860 |
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| Protein GI | 258405118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.314887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00442526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCTGT TTCCTGCTGT GGATATTCAA GACGGACAAT GCGTTCGGCT CAAACAAGGA
AAAGCCGACG CGGTGACCGT GTTTTCGCCT GATCCTCTGG CCGTTTCCCG TCACTGGGAA
ACGCAGGGGG CCTCCTGGTT GCATGTGGTC GACCTGGACG GCGCCTTTAG CGGAATGCCC
CGGAACTACG ACCTGATCCG CTCTATTTGC GATCAGGTGA CCATCCCGGT CCAACTCGGT
GGCGGCATCC GGGATGCCGC CACCGCAGAG AAATATCTTG AAGCCGGGGT GGCCCGCTTG
ATCATCGGGA CCATGGCCCT GGAACAACCC GAGACATTCC GCGCGCTGTG CAGGGCCCAT
CCAGGACGCA TCGGCGTTTC TCTGGACGCC GAGGACGGTT GGTTGAAAAC CAAAGGGTGG
GTCGAAAACA GCGGACGCCG CGTCGCTGAG GTGGTCCCGG AACTGGAGCC TCAGGGTGTG
GCCTTTGTGG TCTATACTGA TATCGCGCGC GACGGCATGC AAAGCGGTGT GAATCTGCGA
GCCCTGGAGG AACTGCTCGA TTCGACCGGT TTGCCGGTCA TCGTGGCTGG CGGGGTGGCT
ACCTTGGAAG ATTTGCAATC CCTGCACCCG CTTCGGGAGA AGGGGCTGGC AGGCGTTATT
ACCGGAAAAG CGATCTATTC GGGATCGCTT GATTTTCCGG CGGCCCTGGA ATGGCTTCGG
TGCCAACCTT AA
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| Protein sequence | MILFPAVDIQ DGQCVRLKQG KADAVTVFSP DPLAVSRHWE TQGASWLHVV DLDGAFSGMP
RNYDLIRSIC DQVTIPVQLG GGIRDAATAE KYLEAGVARL IIGTMALEQP ETFRALCRAH
PGRIGVSLDA EDGWLKTKGW VENSGRRVAE VVPELEPQGV AFVVYTDIAR DGMQSGVNLR
ALEELLDSTG LPVIVAGGVA TLEDLQSLHP LREKGLAGVI TGKAIYSGSL DFPAALEWLR
CQP
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