Gene Dret_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0950 
Symbol 
ID8418770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1124285 
End bp1124746 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content59% 
IMG OID645037517 
Producthypothetical protein 
Protein accessionYP_003197816 
Protein GI258405074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0446042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000586198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGAC TGGAGCACAT TCCCGAACCT ATGCATTCCC ATTTGGTGAA CCTGCCCTGC 
CCAACGTTTG CAACGACACC GTGGGTTCCG GGATGTGAAC TTCCCCGGCG CAGAGTAGCC
ATCATCTCCA CAGCTGGCCT GCACCGCCGA GGCGATCGGC CGTTTACAGG TATGGAAGGC
GACTATCGGG TCATTCCCGG CGATACCCCG GCCAGGGATC TGGTCATGAC CCACATCTCT
TCGAACTTTG ATCGCACCGG ATTCGCCCAG GATTGGAACG TAATCTTTCC TTTGGACCGG
CTACACGAGT TGGCTAACGA ACAGGCGATC GGAAGTGTGG CCGATTTTCA CTATTCCTTC
ATGGGCGCGG CGACCCCGGA GGCCATGGCT GCTCCGGCAC ACAACCTGGC CCAACTCTTA
CTCGGCGACC AAGTAGACGC CGCATTCCTG GTCCCGGTCT GA
 
Protein sequence
MARLEHIPEP MHSHLVNLPC PTFATTPWVP GCELPRRRVA IISTAGLHRR GDRPFTGMEG 
DYRVIPGDTP ARDLVMTHIS SNFDRTGFAQ DWNVIFPLDR LHELANEQAI GSVADFHYSF
MGAATPEAMA APAHNLAQLL LGDQVDAAFL VPV