Gene Dret_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0949 
Symbol 
ID8418769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1123535 
End bp1124266 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID645037516 
Producthypothetical protein 
Protein accessionYP_003197815 
Protein GI258405073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.328342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000745236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCGCGC TTGGTCACTA TCTGGAGGAA AACGGCATTC CCACCACACA AATCAGTCTT 
ATCGCCGAGC ACACCCAGCA CATTAAGCCG CCCCGGGCGT TGTGGGTCCC CTTCGAACTC
GGCCGGCCTT TGGGCACACC TGATCACCCC CAGTTCCAAA CTCGGGTCCT CCTGGCGGCC
TTACGGCTCC TGGAGGCACA GCACGGTCCT GTCCTCGAAT CCTTTCCCGA AGACGCCCCG
GAACCGGCAC AAGACGAAGC AGGAGAAACC ACTTGGGCCT GCCCGATCCC CTCTTCCGCA
ACCGCCGCAA AGGAAACGAC ACAAGAGCGC CTCGTCGAAT CTCTGCACCG GGAAGTGGCG
GAACTCAGGC CCTGGTACGA CCTTGGACGA GAACGAAACG CAAGGACGGC GATGGCAACC
TACACCCCGG AAGGGGCGGT TTCCCTGCTT GCGGACTATC TCCTGCATGG CTCTCCCACC
ACGCCACCAC AAGAGAATAC CCCGGGGGAG GCCTTGCGAT TGGCGGTTCA GGATTTGCAG
ACCTTTTATT TTGAAGCCGC CTCTTCCCGT CCGGACGCCG GTGTGCCAAG TAGCCAAGCC
TTCGACAACT GGTTCTGGAA TGAAACCGTC GCCGCGAAAG CGTTACACAC CGTCAAAGAA
ATTTGCATGG AATCCGCCGA CAAGGAATTG CGTTCGACAG CGACGGTATG CCTTGTGCCC
ATGCCCCGCT GA
 
Protein sequence
MGALGHYLEE NGIPTTQISL IAEHTQHIKP PRALWVPFEL GRPLGTPDHP QFQTRVLLAA 
LRLLEAQHGP VLESFPEDAP EPAQDEAGET TWACPIPSSA TAAKETTQER LVESLHREVA
ELRPWYDLGR ERNARTAMAT YTPEGAVSLL ADYLLHGSPT TPPQENTPGE ALRLAVQDLQ
TFYFEAASSR PDAGVPSSQA FDNWFWNETV AAKALHTVKE ICMESADKEL RSTATVCLVP
MPR