Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0949 |
Symbol | |
ID | 8418769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1123535 |
End bp | 1124266 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645037516 |
Product | hypothetical protein |
Protein accession | YP_003197815 |
Protein GI | 258405073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.328342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000745236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGCGCGC TTGGTCACTA TCTGGAGGAA AACGGCATTC CCACCACACA AATCAGTCTT ATCGCCGAGC ACACCCAGCA CATTAAGCCG CCCCGGGCGT TGTGGGTCCC CTTCGAACTC GGCCGGCCTT TGGGCACACC TGATCACCCC CAGTTCCAAA CTCGGGTCCT CCTGGCGGCC TTACGGCTCC TGGAGGCACA GCACGGTCCT GTCCTCGAAT CCTTTCCCGA AGACGCCCCG GAACCGGCAC AAGACGAAGC AGGAGAAACC ACTTGGGCCT GCCCGATCCC CTCTTCCGCA ACCGCCGCAA AGGAAACGAC ACAAGAGCGC CTCGTCGAAT CTCTGCACCG GGAAGTGGCG GAACTCAGGC CCTGGTACGA CCTTGGACGA GAACGAAACG CAAGGACGGC GATGGCAACC TACACCCCGG AAGGGGCGGT TTCCCTGCTT GCGGACTATC TCCTGCATGG CTCTCCCACC ACGCCACCAC AAGAGAATAC CCCGGGGGAG GCCTTGCGAT TGGCGGTTCA GGATTTGCAG ACCTTTTATT TTGAAGCCGC CTCTTCCCGT CCGGACGCCG GTGTGCCAAG TAGCCAAGCC TTCGACAACT GGTTCTGGAA TGAAACCGTC GCCGCGAAAG CGTTACACAC CGTCAAAGAA ATTTGCATGG AATCCGCCGA CAAGGAATTG CGTTCGACAG CGACGGTATG CCTTGTGCCC ATGCCCCGCT GA
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Protein sequence | MGALGHYLEE NGIPTTQISL IAEHTQHIKP PRALWVPFEL GRPLGTPDHP QFQTRVLLAA LRLLEAQHGP VLESFPEDAP EPAQDEAGET TWACPIPSSA TAAKETTQER LVESLHREVA ELRPWYDLGR ERNARTAMAT YTPEGAVSLL ADYLLHGSPT TPPQENTPGE ALRLAVQDLQ TFYFEAASSR PDAGVPSSQA FDNWFWNETV AAKALHTVKE ICMESADKEL RSTATVCLVP MPR
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