| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0946 |
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| Symbol | |
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| ID | 8418766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1119359 |
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| End bp | 1120582 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037513 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_003197812 |
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| Protein GI | 258405070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.415737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000365484 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCAG TATGTTCTTC GATACAACAC CTGGTTCCTT TATTTATCCT GGTGTTATTG
TCCATCCCGG CCGGAGCTGC CGACAACGCC GTGACGGGCA ATGCCGGGTC AACGCTTTAT
GTTGAAAGTT TTGGGGCGTT TGATGAACCC TGGGCCATGT GCTTTCTGCC GAACAAAAAT
CTGCTTGTCA CGGAGAAAAA AGGCAATCTG ATCCTGTTCA ATGTGGATGA CCGCACCCGG
ACAGCGGTTC AGGGGGTGCC CAAGGTGGCC TACGGCGGCC AGGGGGGATT GGGGGATGTT
ATTCTTCACC CGCAATTTGA GGACAACCAC TGGATATACC TTTCCTATGC TGAGCAGGAC
GCATCAGGCA AGAAAGGTGC GGTTGTGATC CGGGCAACGC TTCGTTTCAA CGATGCCGGG
CCTGCACTCG AAGGCCATCA GATTATCTGG AAACAGATCC CTAAAGTACC CGGCAGCGGG
CACTACTCGC ACCGGCTGGC ATTCAGCCCG GACGGAAAAT TGTTCATCAC CTCTGGTGAT
CGCCAAAAGC AGACCCCGGC CCAGGACTGG ACCCAGAATC TGGGCAAGGT TATCCGTTTA
AACGAGGACG GATCTGTTCC GCCTGACAAC CCATTCCAGA ATAAGGGAGA CCTTGCCAAA
ACCTTCTGGA CGCTGGGGCA CCGGAACATT CTGGGGATTG CCTTTGATCG CCAGGGCCGG
CTGTGGACTC ATGAAATGGG ACCCAGGCAC GGGGACGAGT TCAACTTGAT TGTCAGGGGA
GACAATTATG GTTGGCCCAT TGTTTCCTGG GGCGACCAGT ATTCAGGAAT TCCCATCCCT
GATCATGACA CCCGCCCGGA ATTTAATGCA CCTGAAATGT ACTGGGTTCC CACCGTTGCC
CCTTCAGGCC TGATTATCTA TGACGGTGCC CTTTTCCAGC AATGGCAGGG TGATGCATTC
CTTGGCGGGC TGCGATCCCG ATCTCTGGTC CGCATTGAAA TGAACGGGAC CAAGGCCCAT
GAGGCAGAAC GCTTTGCCAT GGGCAAACGC ATCCGGGAAA TTGAGCAGGG TCCAAATGGT
GCCATCTGGC TTTTGGAGGA CAAACAGAAC GGCCGCTTGC TTCGGCTGAC GCCCAAGAAC
GGCGAGATTG TTGATCGGAA TGCGTTGATA CCGGGTCGCA CGACAGGGGC CAATTGCTGC
TTACAGCGGA GACTCGCAGG GTAA
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| Protein sequence | MKPVCSSIQH LVPLFILVLL SIPAGAADNA VTGNAGSTLY VESFGAFDEP WAMCFLPNKN
LLVTEKKGNL ILFNVDDRTR TAVQGVPKVA YGGQGGLGDV ILHPQFEDNH WIYLSYAEQD
ASGKKGAVVI RATLRFNDAG PALEGHQIIW KQIPKVPGSG HYSHRLAFSP DGKLFITSGD
RQKQTPAQDW TQNLGKVIRL NEDGSVPPDN PFQNKGDLAK TFWTLGHRNI LGIAFDRQGR
LWTHEMGPRH GDEFNLIVRG DNYGWPIVSW GDQYSGIPIP DHDTRPEFNA PEMYWVPTVA
PSGLIIYDGA LFQQWQGDAF LGGLRSRSLV RIEMNGTKAH EAERFAMGKR IREIEQGPNG
AIWLLEDKQN GRLLRLTPKN GEIVDRNALI PGRTTGANCC LQRRLAG
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