| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0902 |
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| Symbol | |
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| ID | 8418722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1068053 |
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| End bp | 1069471 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037472 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003197771 |
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| Protein GI | 258405029 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.716519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTC GCGTCTCAAC GCCGACCACT GCTCACCGCC GCCATCACAC ACCAAAGCCC
GAAGCCTCCT CCGAAGCGGC TTTGAAGCAG GCCCTGCGCC GTGAAGTACG CAAACGCAAG
GATGCCGAAA AACACTTGGA GATCGCCACG CAATTCGACG ATCTCACAGG GTTGGCCAAT
CGCAATCTGG CTTTGCGCCG TCTGGAACAG GCCACGGAAA AAGCCCGTCT CGAGGGGGGC
AAGGCGGCTT TGCTCTACCT CGATCTCATC GACTTCAAGG CCATCAACAA CGCCTTCGGC
TATGAATGCG GCGATTGCAT TCTCCGCGAC ATCGGTCAAC GCCTCCAATC CATCAGCGGG
GCGTCGGACA CGGTCGCCCG GATCACCGGC GACGAATTCG TCTTCCTGCA ACTCGATATT
CAAGGGCACG ATTCGGTCTA CAGCCTCCTG GCCGCGATTC AGGAAGTGCT GCACCGGCCG
TTTCAGACCA AGCAAACCGA ACTTTTGCTC AATTTCTGTC TCGGGTTCAG TATTTTTCCG
GATTGGGCAG ACAATTGGCA GGAGCTGTCC CGGCAGGCCC GTGTGGCACT CTCCAACGCC
AAAGGATCCC GGGAAAACAA GATCCACGCC TACGATCCGG CGCAGGACAA GAGCACCGAC
CAGTTCGGTA TCATCCAGGA AACGAAAAAG GCCCTGCGCC ACGACGAATT TCGGCTCCAC
TACCAGCCCA TCGTCGACCT CAAATCAGCG CAGGTGGTGG CCTATGAAAG CCTTTTGCGC
TGGCAGAAGC CAGACCGGAT GATCCCGCCA GGTGCTTTTT TGCCGGTCAT TGAACACACC
GAAATCATGA CCGAAATCGG GGATTTCGTC CTCTCCACCG CCTGCGAGCA GATGAACAAT
TGGCTGATGA ATTTGAGCAC CCAGCACGCC TTCAAGCTCA GCGTCAACAT CTCCGCCAAC
CAGCTCGCCT CGGAGAACTT TCCCTACGAA GGGCAGAGTC TGTTCGAGGC CTACCGGCTG
GCCACCCAAC GCTTTATCTT CGAAGTTACC GAAACCGCGG TCATCGAAAA TATCGACCAC
GCCAAAGAAG TCCTGACCGA ATTCGCCAAC CTGGGCGTCG AGATCTGGCT GGACGATTTC
GGGACCGGCT ACTCGTCTCT GCTGGCCCTG CGCGAATTGC CCATCAGCGT GGTCAAGATC
GACAAGACCT TTGTCACCGG CATCGACCAG CCCGACTTCA ACCCCGAATT CCTGCGCGCC
CTGATCAACC TCTCCCATGA CCTCGGGAAA CGGGTCCTGG CTGAAGGGGT CGAAACCCGG
GCCCAACGGG ACATCCTCAT CGGCTATGGT TGCGATCTCG CCCAAGGGTT CTATTTCGGC
CACCCCCTGC CGCCTTCGGA GGCGGTGCCC CTTTCCTGA
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| Protein sequence | MNSRVSTPTT AHRRHHTPKP EASSEAALKQ ALRREVRKRK DAEKHLEIAT QFDDLTGLAN
RNLALRRLEQ ATEKARLEGG KAALLYLDLI DFKAINNAFG YECGDCILRD IGQRLQSISG
ASDTVARITG DEFVFLQLDI QGHDSVYSLL AAIQEVLHRP FQTKQTELLL NFCLGFSIFP
DWADNWQELS RQARVALSNA KGSRENKIHA YDPAQDKSTD QFGIIQETKK ALRHDEFRLH
YQPIVDLKSA QVVAYESLLR WQKPDRMIPP GAFLPVIEHT EIMTEIGDFV LSTACEQMNN
WLMNLSTQHA FKLSVNISAN QLASENFPYE GQSLFEAYRL ATQRFIFEVT ETAVIENIDH
AKEVLTEFAN LGVEIWLDDF GTGYSSLLAL RELPISVVKI DKTFVTGIDQ PDFNPEFLRA
LINLSHDLGK RVLAEGVETR AQRDILIGYG CDLAQGFYFG HPLPPSEAVP LS
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