| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0863 |
|---|
| Symbol | |
|---|
| ID | 8418682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1021720 |
|---|
| End bp | 1022490 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645037432 |
|---|
| Product | MJ0042 family finger-like protein |
|---|
| Protein accession | YP_003197732 |
|---|
| Protein GI | 258404990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.305233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCA CCTGTCCCAA TTGCGAGGCA CAATTCCAGC TTGCTGCTGA CCGGCTCTCG
GAGAAGACGG TCCGGGTGCG CTGTACCTGG TGCGGCCATG TCTTTGTCCC CGAACAGGAG
TCGCAACCGG CTCCCACCGA GATGGCCTCT AATTCCTTTG GTCCGGAATC CGAGGAAGAG
GAATCGGGTG TTGCTGACAC GTCCTCCGCG CCACGGCGCC CCTCCCGGTG GCGTCTGGCC
ATGCTTTTGC TCCTGTTGAT CCTCGTTCTG GCCGGGGCGG GGTGGTATTA TTGGGGCGGC
CTTCAAGGGG TGCCCTTTTT GCCCGGGGAC CAGAATCCGC AACAGACCGC GGTCACGCCT
CCGACGGATG CGGAATTGTC AAAGATTGAA CTCCGTGATG TCCGTCAATA TTTTGTCGAC
AACGAAAAAC TTGGCGACCT GTTTGTCATC GAGGGCAAAG CGGTCAACAC ATTTGCCGAA
CCCAAGGGCT TGATCAAAAT CGAAGCCCAA CTCTTCGATG CCAACTCCAC AGTGGTCGCG
GAAAAGACCC TGCTTTGCGG CAACACGGTC TCTTTATTCC AATTGCAGGT GCTCTCGCGG
GATAAATTGG AATCGGCCCT GTCGGCCAAA GTCGGGGTTC TGACCAAAAA CACCAGTGTG
CCCCCCCAGG AATCCGTGCC GTTCATGGCT GTCTTTTTCT CCCCTCCCTC TTCAGTAGAG
GAATTCGGGC TGCGGGTCGT GCAGGCCAAG ACCCCGCCCA ACGATTCCTA G
|
|---|
| Protein sequence | MIITCPNCEA QFQLAADRLS EKTVRVRCTW CGHVFVPEQE SQPAPTEMAS NSFGPESEEE
ESGVADTSSA PRRPSRWRLA MLLLLLILVL AGAGWYYWGG LQGVPFLPGD QNPQQTAVTP
PTDAELSKIE LRDVRQYFVD NEKLGDLFVI EGKAVNTFAE PKGLIKIEAQ LFDANSTVVA
EKTLLCGNTV SLFQLQVLSR DKLESALSAK VGVLTKNTSV PPQESVPFMA VFFSPPSSVE
EFGLRVVQAK TPPNDS
|
|---|
| |