Gene Dret_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0862 
Symbol 
ID8418681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1020998 
End bp1021540 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID645037431 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003197731 
Protein GI258404989 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.353594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.191843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC CAATGCACGT TGTCTATAGT CGTGAGGATA TAACCAAGCG CATTCAGCGC 
CTCGGGGAGG AAATCACCGA GGCATACCAA GATGTCCGCG AGCCGATTGT GGCCGTCTGT
GTGTTAAAGG GTGCTTTTGT TTTTTTTGCC GATCTGGTCC GGGAATTGGA TCTCGATGTG
GAGATCGATT TTGTCCGTCT GGCGAGTTAT GGGCAGCAGA CACAACGCCA TTTCAAGGTC
CAATTCACCA AGGATTTGGA GACACCGGTC ACAGATCGCC ATGTGCTCCT GGTCGAGGAT
ATCGTCGATA CCGGCCACTC TATCGAGTAC CTGAGTCAGG TGATGTGGGC GCGAAAGCCC
AAATCGGTTC GGATATGCGC TCTGGTGGAC AAAAAGGAGC GGCGTGAAGT GGATGTCCAT
GTGGATTATC CGGGCTTCGA CCTGGAAAAG GGCTTCATTG TAGGGTATGG CCTTGATTAT
GCAGAACGCT ACCGCCACCT CGACTCCATT TGTACATTTG TCAATCCTCC TGAAGAAGCG
TAA
 
Protein sequence
MDTPMHVVYS REDITKRIQR LGEEITEAYQ DVREPIVAVC VLKGAFVFFA DLVRELDLDV 
EIDFVRLASY GQQTQRHFKV QFTKDLETPV TDRHVLLVED IVDTGHSIEY LSQVMWARKP
KSVRICALVD KKERREVDVH VDYPGFDLEK GFIVGYGLDY AERYRHLDSI CTFVNPPEEA