Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0862 |
Symbol | |
ID | 8418681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1020998 |
End bp | 1021540 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645037431 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_003197731 |
Protein GI | 258404989 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.353594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.191843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACGC CAATGCACGT TGTCTATAGT CGTGAGGATA TAACCAAGCG CATTCAGCGC CTCGGGGAGG AAATCACCGA GGCATACCAA GATGTCCGCG AGCCGATTGT GGCCGTCTGT GTGTTAAAGG GTGCTTTTGT TTTTTTTGCC GATCTGGTCC GGGAATTGGA TCTCGATGTG GAGATCGATT TTGTCCGTCT GGCGAGTTAT GGGCAGCAGA CACAACGCCA TTTCAAGGTC CAATTCACCA AGGATTTGGA GACACCGGTC ACAGATCGCC ATGTGCTCCT GGTCGAGGAT ATCGTCGATA CCGGCCACTC TATCGAGTAC CTGAGTCAGG TGATGTGGGC GCGAAAGCCC AAATCGGTTC GGATATGCGC TCTGGTGGAC AAAAAGGAGC GGCGTGAAGT GGATGTCCAT GTGGATTATC CGGGCTTCGA CCTGGAAAAG GGCTTCATTG TAGGGTATGG CCTTGATTAT GCAGAACGCT ACCGCCACCT CGACTCCATT TGTACATTTG TCAATCCTCC TGAAGAAGCG TAA
|
Protein sequence | MDTPMHVVYS REDITKRIQR LGEEITEAYQ DVREPIVAVC VLKGAFVFFA DLVRELDLDV EIDFVRLASY GQQTQRHFKV QFTKDLETPV TDRHVLLVED IVDTGHSIEY LSQVMWARKP KSVRICALVD KKERREVDVH VDYPGFDLEK GFIVGYGLDY AERYRHLDSI CTFVNPPEEA
|
| |