Gene Dret_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0860 
Symbol 
ID8418679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1019657 
End bp1020145 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content57% 
IMG OID645037429 
ProductRedoxin domain protein 
Protein accessionYP_003197729 
Protein GI258404987 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00216693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0861373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTT TGCTGGTATG GGCAGCGGTA ACAGCGGCCC TTGTGTTCGG ACCGCTGACG 
GCGGGGGCGA CCCAAAGCGC TTCCCTGCCG AGGTACTCGG TTGATACCGT ATTGCAGACC
ATCAGCGAGG CCCGGGGACA AGTGGTCGTC CTGAATTTTT GGGCCACGTG GTGCGCCGGA
TGCCGTGAAG AGATCCCGGA ACTCGTGGCG CTTCGAGAAA AGTATGCGGA CCACGAGGTC
CTGATCGTGG GCCTGTCCTT GGATACTGAT CCCGGCACTG TCCGGGCTTT TCTGGAGCGG
TTTCCCGTCA ATTACCGTAT GGCCCACGCG GCCGGGGATA TCCAGATGCT CTACGATTTG
ACAACGATCC CAAAAACGAT TGTCTACGGC CCAAAAGGGC AAAAACAGCT CGACCACACT
GGTTTTATGT CCACAGGCGA TTTGACTCAA ACCATCGACC CACTGCTCAC TCATGAACAC
AACAACTAA
 
Protein sequence
MRSLLVWAAV TAALVFGPLT AGATQSASLP RYSVDTVLQT ISEARGQVVV LNFWATWCAG 
CREEIPELVA LREKYADHEV LIVGLSLDTD PGTVRAFLER FPVNYRMAHA AGDIQMLYDL
TTIPKTIVYG PKGQKQLDHT GFMSTGDLTQ TIDPLLTHEH NN