| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0851 |
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| Symbol | |
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| ID | 8418670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1008894 |
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| End bp | 1010876 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037420 |
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| Product | transketolase |
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| Protein accession | YP_003197720 |
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| Protein GI | 258404978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0149061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.206532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAG AACACGACCA ACACAATATC AATGTCATCA AAGGGTTGAT CATGGACGCC
ACCCGCCGAG CCAATTCCGG CCATCCCGGC GGAGCCATGT CCTCGGCTGA TTTTGCCTAT
ATCCTGTTCA AGGAATACCT CAAATTTGAT CCCCAGGATC CCGACTGGCC CGACCGGGAC
CGCTTCGTTC TCTCGGCCGG GCACGAATCC ATGCTCCTGT ACAGCCTGCT GCGCCTTGTC
GGCTACCTCA ACGACGACGA CTTGCAGTCT TTCCGTCAAT ACAAAAGCCG GACGCCAGGA
CACCCGGAAC ACGATCTGAC GCCTGGAGTC GAAGCCACAA CCGGTCCGCT GGGTCAGGGA
TTTGCCATGG CCGGCGGTTT GGCCACTGCT GAACAATTCC TGCGGGGAAC CTGGGGTGAG
GAGATCACTG ACCACTATAC CTACGTTCTG GCCTCAGACG GCGATATCCA GGAACCGGTC
TGTCTGGGCA GCGCGGCTTT ATTCGGGCAA TGGGGTCTGG GACGGCTGAT CGTTTATTAC
GACAGCAACG CTATCCAATT GGCCGGCCCT ACAGCACGGT GCGATTGCGC CGACAAACGC
CGCCTTTTCG AAAGCCTGTG CTGGCAGGTC ATCGAAATCG ACGGCCACGA TCACGAACAG
ATCCGCACGG CTCTGGACCA GGCTCGTGCG GAAACAACCC GGCCTACATT GATCATCGGC
CACACGACCA TCGCCAAAGG CAGCGCCTCC CTGGAGGGCA GCGCCGACAC CCACGGCGCC
CCATTCTCTG AAGAGGAAAT CGCCCAAACC AAGGTGAAAT TGGGCCTTTC GTCGGAACTA
TTTGCCATCC CCCAAGAGAC TGAAGATGCT TTTCGAGACC GCTTCCCGTT GCTGCGTCAG
ACGGCGGACG ATTGGCGACT CCGGTTGCAG CAGCGCCAGC AAAACGATCC TGCATTCGCT
CAGGCATGGG AACGCCAGCA CCGCCCAGTG CTGCCGGCTG AGATCACCTG GCCGGAATTC
GAGACCGGGA GTAAAGTCGC CACACGCAAA GCCTTCGGCA AATGTCTTGA GAGTCTGATT
GAACAACTCC CCCATTTGGT CGGTGGCTCA GCCGACCTGG ACCCCTCCAA CCAGACAGCG
ACTTGGCGCG AGAAGGTCGG CATTTTCGGC AACCAGAATC CCGCCGGGCG CAATCTCTGC
TTCGGGGTTC GGGAGTTTCC GATGGGAGCG GTGGTCAATG GACTCGCCCT GCACGGCGGT
GTCGTTCCCT TCGGGGCCAC CTTTCTGGTT TTCTCGGATT ATGAGCGCAA CGCATTGCGC
ATGTCAGCGC TCCAAAAACT GCCGGCTCTG CATATCTTCA CCCACGACTC CTTTCACGTC
GGTGAAGACG GCCCCACCCA CCAGCCTGTG GAACATGTCA GCTCCCTGCG CTTGATCCCG
AATCTCCTGG TCTTTCGCCC GGCAGATGCG AACGAAAGTC GCGCCTGCAT GGAACTCGCC
TTGCAACAAA AGGATCGACC GAGCGCCCTG CTCTTTACCC GGCAAGGCGT ACCGGTTTTA
CCTGCCGCCC AGACGCCGGA ATTGCAGGAG GGGGTTGGCC GTGGAGCGTA CATCGTCCAA
GAAGCGCAGG ACGGTGCCCC CGACATGATC TTCATGGCCA CGGGTTCTGA GGTGCATCTG
GCCCTTGAGG CGGCTCAGCA GGTGGATCCT GGCCGCATCC GCGTGGTCAG CATGCCCTGC
CTGGAGCTTT TTGAAGAACA GCCACTCGAA TACCAGGAAC AGATCCTGCC TGCTTCGGTC
ACGCGCCGGG TGGCCATTGA AGCCGGACGG ACCGATATGT GGTATAAGTA CACCGGCCGC
TACGGTCTGG TCATCGGCCT GGACCATTTC GGAGACTCGG CCCCTGCCGG GGATCTGGTC
GAGGCGTACG GATTTACTCC AGAAGCCGTT GCCAAGTCGG TCCGCAGGCA CTTCGCCTCC
TAA
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| Protein sequence | MPSEHDQHNI NVIKGLIMDA TRRANSGHPG GAMSSADFAY ILFKEYLKFD PQDPDWPDRD
RFVLSAGHES MLLYSLLRLV GYLNDDDLQS FRQYKSRTPG HPEHDLTPGV EATTGPLGQG
FAMAGGLATA EQFLRGTWGE EITDHYTYVL ASDGDIQEPV CLGSAALFGQ WGLGRLIVYY
DSNAIQLAGP TARCDCADKR RLFESLCWQV IEIDGHDHEQ IRTALDQARA ETTRPTLIIG
HTTIAKGSAS LEGSADTHGA PFSEEEIAQT KVKLGLSSEL FAIPQETEDA FRDRFPLLRQ
TADDWRLRLQ QRQQNDPAFA QAWERQHRPV LPAEITWPEF ETGSKVATRK AFGKCLESLI
EQLPHLVGGS ADLDPSNQTA TWREKVGIFG NQNPAGRNLC FGVREFPMGA VVNGLALHGG
VVPFGATFLV FSDYERNALR MSALQKLPAL HIFTHDSFHV GEDGPTHQPV EHVSSLRLIP
NLLVFRPADA NESRACMELA LQQKDRPSAL LFTRQGVPVL PAAQTPELQE GVGRGAYIVQ
EAQDGAPDMI FMATGSEVHL ALEAAQQVDP GRIRVVSMPC LELFEEQPLE YQEQILPASV
TRRVAIEAGR TDMWYKYTGR YGLVIGLDHF GDSAPAGDLV EAYGFTPEAV AKSVRRHFAS
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