| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0847 |
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| Symbol | |
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| ID | 8418666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1004824 |
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| End bp | 1005903 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037416 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003197716 |
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| Protein GI | 258404974 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0561071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.116765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGC AATTGATCAA ACCCGGAACC GCGGTGAATT TCATCGGGCG CCGGAAAATC
GCATTGGTCG TATCGGCCTT GGTCCTGCTG CTCGGGTTGG GCTCCTTGCT CCTGAAAGGG
GGGCCAAAAT ACGGCATTGA TTTTGCCGGA GGGATCACCG TTCAGACGCA ATTTGCGGCC
GATGTGTCGC TCAAGGATAT CAAAGCAGCT CTGGCAACGG CGGAGTTGCC CAGCCTCAAT
GTCCAAAAAT TCGGTACAGA GGGGGGCAAT GAATATCTGT TCCGGGTGGC GGCCGTGGAT
ATCAGTTCCT CTGAGGTCCG TCAGGCTGTC CAGGAGGCCC TGAGTGCCGA GATGGATACC
GGTTTTGAAA TCCGGCGCCT GGAAATGGTC GGGCCGAAAG TCGGGGCGGA TCTACGGGCC
AAGGCTTTAG AAGCCTTGTT CTACGCCATA TTGATCATTT CTATTTATAT CTCGGGACGG
TTTGAACACC GCTGGCTGGC TTCGGCGCTC ATGGCCGGCG GGCTTGCCGG GGGGCTGTAT
GTTCTCCAAA TCGCCGGGTT TCCGCTCAGT GCCCTTGTTG TCGCCGCCCT GGTGATAGCC
GTGGGAATGT GTTGGTATTT AAAACTCAAT TTTGCCCTTG GGGCGGTCAT CGCCCTGATC
CATGACGTTT TAGTCACTGT CGGTGTGTTT TCCTTGCTCA ACAAGGAATT CGACCTCTCG
ATCGTGGCGG CGCTTTTGAC CATTATTGGA TATTCCCTGA ACGATACGAT CATCGTCTTT
GACCGTATCC GGGAAAATCT CCGGGGCAAG GCCGCCAAAC ACCGCTCTTT GAAGGAAACG
ATCAATATCA GCATCAACCA GACCTTGAGC CGGACGATCT TGACGTCGGG AACGACTTTG
CTGGTTGTCA TCTCGTTGTT CCTTTTCGGG GGCGGGGTGA TCCACAATTT CGCCTTCGCC
TTGCTTGTCG GCGTCATTGT CGGGACATAT TCCTCCATCT TTGTGGCCAG CCCGTTGCTT
TTGGGGTTTC AGATCGATCC GCCTGAAGAA AAGGACGCTG TTCAAGAACA AACCGTCTGA
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| Protein sequence | MGLQLIKPGT AVNFIGRRKI ALVVSALVLL LGLGSLLLKG GPKYGIDFAG GITVQTQFAA
DVSLKDIKAA LATAELPSLN VQKFGTEGGN EYLFRVAAVD ISSSEVRQAV QEALSAEMDT
GFEIRRLEMV GPKVGADLRA KALEALFYAI LIISIYISGR FEHRWLASAL MAGGLAGGLY
VLQIAGFPLS ALVVAALVIA VGMCWYLKLN FALGAVIALI HDVLVTVGVF SLLNKEFDLS
IVAALLTIIG YSLNDTIIVF DRIRENLRGK AAKHRSLKET INISINQTLS RTILTSGTTL
LVVISLFLFG GGVIHNFAFA LLVGVIVGTY SSIFVASPLL LGFQIDPPEE KDAVQEQTV
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