| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0824 |
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| Symbol | |
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| ID | 8418642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 975083 |
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| End bp | 975949 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037392 |
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| Product | UspA domain protein |
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| Protein accession | YP_003197693 |
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| Protein GI | 258404951 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0929025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.400518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATA AGACGGCCTC AATTCGACGC ATTCTCGTGC CCCTGGATAC ATCCCCTCTT
AGCCGCCATG CTCTCAAAAC AGCCATACTC CTGGCCCAGC AAACGGGTGC GGAGGTGTTC
GGTCTCTTTG TGGAAGATAT GGATTTGCTG CTTTGGGCCG AATTGCCCTG TGCCGCAGAG
GTTGACGCCT ATTCTCTTTC TGTGCGTACC GTTGAGCGAA CGTCATTGGA GCGACAGTTG
CGGGCCCAGG CGGGATATTT GCGCCGGATC ATGGGCCAAA TGGCGCAGGA GGCGAACGTT
CCCTGGCATT TTGAGGTGGT CCGGGGGAGT GTGGCGCAGG AGGTGCTCGG AGCCAGTTTG
CGTGCCGATT TGACGGTCCT GGGCAAAGGG CGCACTGTAA TGTCCCCACA GGGGCGTCTT
GGCTCAACTG TGCGAAAGGT CATAGCTCAG GGGACCTGCG CCACGCTGAT ACTCGAGTAT
GTCGGCAAAC CATTGGATCC GGTTCTGGTG ATCTATACGG GATCTCCGCT GTCCAAACAG
GCTCTGCATA TGGCGCGCTG GCTGATGCAT GATCAAAAAC GGCGCCTGAA AGTGCTCGTT
CCTGCAGAGC AAAATGCGAC AATGGAGCCT CGCCGCCAGG AAATCCACGG CCTTATGGCG
GATGTAACGG ACCGGATCCA GCTGCAATCG TTTCCCGTGC GCAGTATCGA AGCCTTTGTC
CATCTTTTGC AGGAAGAAGG ACGAGGGCCC TTGGTGTTGC CGTGTGATGA ATACTGGCTT
GGCCCTCAAT TGGAGGGCCT GGTTTCCCGT CTGCCCAACC CGATTCTTTT GGTCCGACAA
GCGGATCCAG CTCCTGAGAT CAGGTGA
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| Protein sequence | MANKTASIRR ILVPLDTSPL SRHALKTAIL LAQQTGAEVF GLFVEDMDLL LWAELPCAAE
VDAYSLSVRT VERTSLERQL RAQAGYLRRI MGQMAQEANV PWHFEVVRGS VAQEVLGASL
RADLTVLGKG RTVMSPQGRL GSTVRKVIAQ GTCATLILEY VGKPLDPVLV IYTGSPLSKQ
ALHMARWLMH DQKRRLKVLV PAEQNATMEP RRQEIHGLMA DVTDRIQLQS FPVRSIEAFV
HLLQEEGRGP LVLPCDEYWL GPQLEGLVSR LPNPILLVRQ ADPAPEIR
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