Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0778 |
Symbol | |
ID | 8418594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 924896 |
End bp | 926215 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037345 |
Product | Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Protein accession | YP_003197648 |
Protein GI | 258404906 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTAT TCACTCCAGA AGAAGCCCTC GCCTATCACC GCAATGGTAA ACGCGGCAAA CTTGAAGTTT TCCCGGTCAA GCCCTGCGCC ACCCAAAAGG ATCTCTCCAT GGCCTACTCC CCCGGTGTCG CTGAAGCCTG CCGGGCGATT GCGGCTGATC CGGACACGGT TTTCGACTAT ACCGGCCGTG GCAATCTCGT CGCAGTCGTC TCCAACGGCA GTGCGGTGCT GGGTCTGGGC AACATCGGGC CTTTGGCTGG TAAGCCGGTT ATGGAAGGCA AAGGGGTATT GTTTAAAATT TTTGCCGACA TCGATGTCTA TGACATCAAT CTGAACTGCA CCTCCCCACA AGCCATCATC GAAACAGTCA AGGCCATGGA ACCAACCTTC GGCGGCATCA ACCTTGAAGA CATCAAAGCT CCAGAATGTT TTGAAATAGA GAAGACCCTC AAGCAAGAAC TCGATATCCC AGTATTCCAT GACGATCAGC ACGGCACGGC GATCATTTCT GGAGCCGGGC TGTTGAACAC CTTGGAACTG ACCGGCAAAC GGATTGAAAA CCTCCGGGTG GTCATCAGCG GGGCGGGAGC GGCGGGCATT GCCTGTGCCC AATTCTACGT CACCCTCGGC GTGGATCCGG CCAATATCCT CATGTTCGAT TCGCGCGGCC TGATCCACCC TCAGCGCACC TCCGGGATGA ACCCTTACAA AGAACAGTTC GCCAACGGCA CTCCGGACAT GGACCTTACC GCGGCCATGC AGGGGGCCGA TCTCTTTCTC GGCCTGTCCC AAAAAGACCT TCTCAGCCAG GATATGGTCG CGGCCATGGC TGACAAACCG GTCATTTTCG CAATGGCCAA CCCGGACCCG GAAATCCCCT ACCCAAGCGC CAAGGCGGTC CGCCCGGATT GCATCATGGG CACTGGCCGA TCCGATTTCC CCAATCAGGT CAACAATGTC TCAGGGTTTC CCTCCATTTT CCGGGGCGCT TTGGATGTCC GGGCCACATC GATCAATGAA GAGATGAAGG TCGCAGCGGC CAGAGCCCTT GCCGAATTGG CCAAGGAACC GGTTCCTGAA GCCATGCTTG AGGCCTACGG CGTGGATAAG CTGGAATTCG GACCTGACTA CATTATACCC AAGCCGCTCG ACCCTCGGGT CCTTCTCTGG GAGGCTCCGG CGGTGGCCCG GGCGGCGATG GACTCTGGCG TCGCCAGACA ACCGGTTGAC CTCGAGCCCT ATACGCAAAA CCTCCAGCGC CGGCTGGATC AATCCCGGGC CCGTATCACC GATATTGTGG AAAGCTACGC CGCAAAGTAA
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Protein sequence | MTLFTPEEAL AYHRNGKRGK LEVFPVKPCA TQKDLSMAYS PGVAEACRAI AADPDTVFDY TGRGNLVAVV SNGSAVLGLG NIGPLAGKPV MEGKGVLFKI FADIDVYDIN LNCTSPQAII ETVKAMEPTF GGINLEDIKA PECFEIEKTL KQELDIPVFH DDQHGTAIIS GAGLLNTLEL TGKRIENLRV VISGAGAAGI ACAQFYVTLG VDPANILMFD SRGLIHPQRT SGMNPYKEQF ANGTPDMDLT AAMQGADLFL GLSQKDLLSQ DMVAAMADKP VIFAMANPDP EIPYPSAKAV RPDCIMGTGR SDFPNQVNNV SGFPSIFRGA LDVRATSINE EMKVAAARAL AELAKEPVPE AMLEAYGVDK LEFGPDYIIP KPLDPRVLLW EAPAVARAAM DSGVARQPVD LEPYTQNLQR RLDQSRARIT DIVESYAAK
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