Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0701 |
Symbol | |
ID | 8418514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 834655 |
End bp | 836013 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037265 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003197571 |
Protein GI | 258404829 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.390786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0731978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCA TACATATCCT TTTTCTTAGC GCAAAAGCAA CAACCGACAG GGAACTCGAA TCCCTTTTGG AGCAAGACGG GTATGCGGTA ACCACGACCC GGGACTTCGA AAGCCTGGAA CGGCATCTCG ACGGTCGCGA CTTTGACCTG GTCATTCTCT GCCTCCCTCT GGCCCCGGAC CAGGAACTCA ACCTCCTGGA AAAAATCAAG AGCCACTCCC CCTTGACCGA GGTTATCCTG ATCACCAGCA CCCCCAACGT CGAGGGGGCG GTGGCCTCCA TGAAAAAAGG GGCGTTCCAT TACATGGCCC AGCCCTATAA ACCCAATGAA GTCCGGCTGC TGACCTCCAA TGCCCTGGAA AAACGGTTGT TGCGCCTTGA GGTCCAGGAA TTGCGCAGCA TGGTCCGTAA CAAGGAATCG CTGCCCAACC TGATCGGCAA AAACCCGCGG ATGCAGAACC TGAAGCGCGA AATCGCCCGG GTGGCCCCGC TTGACTGTAA CGTGCTCATC CTGGGGGAAA CCGGTACGGG CAAGGAATTG GTGGCCAAGA CCATCCACAA TATGAGTATG CGGGCCGACC AAAAATTTTT GGCTGTAAAC TGCGGGGCCC TGAACGAGGA ATTGCTCGGC AACGAATTGT TCGGACACGA AAAGGAGGCC TTCACCGGTG CCCAACGGGT TAAAAAGGGA GTCTTCGAAG CCCTCGCCGG CGGAACTTTG CTTTTGGACG AAATCGGCGA CATGCCGCTG GCCATGCAGG TCCAACTCCT GCGCGTGCTG CAGGAAAAAA GCATCATGCG TATCGGAGGC ACCCGGGAGA TCCCTGTTGA CACCCGGGTG CTGGCCGCCA CCAACCGTCC CTTGCAGGAG GACGTTCAAG CCGGAGGCTT TCGCCAGGAT CTTTATTACC GCCTCAACGT CTTCACCCTG CGCATCCCGC CGCTACGGGA ACGTGCCGAC GACATCCCGC TTTTTTGCCG CTACTTTCTG GAAAAATACA CGCTGGAGTT CAATAAAACC ATCGAACGGT TCTCGGACGA AGTTGTCGAG ATCCTCCAGC ATTATCAATT TCCGGGCAAT GTGCGTGAAC TGGAAAACAT CATCGAACGG GCCATCGTCC TCTGCGACGG ACCGGTCCTC GAACGGCGCC ATCTGCCCCG CCGCCTCAGG AGCCCCCGGG CCTTGCAATA CGAGACCAAA ACCCGGGACC ATCTCCTGCC GTTGGCGGAA TTGGAACGGC AATATATCGA GGACGTGCTG AGTATTGTCG GGGGCAACAA GAAAAAAGCG GCCGAAGTCT TAGGCATCGA TCGCACCACC CTGTGGCGCA AACTCAAAAA TCAGAACGAG ACTTCCTGA
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Protein sequence | MQSIHILFLS AKATTDRELE SLLEQDGYAV TTTRDFESLE RHLDGRDFDL VILCLPLAPD QELNLLEKIK SHSPLTEVIL ITSTPNVEGA VASMKKGAFH YMAQPYKPNE VRLLTSNALE KRLLRLEVQE LRSMVRNKES LPNLIGKNPR MQNLKREIAR VAPLDCNVLI LGETGTGKEL VAKTIHNMSM RADQKFLAVN CGALNEELLG NELFGHEKEA FTGAQRVKKG VFEALAGGTL LLDEIGDMPL AMQVQLLRVL QEKSIMRIGG TREIPVDTRV LAATNRPLQE DVQAGGFRQD LYYRLNVFTL RIPPLRERAD DIPLFCRYFL EKYTLEFNKT IERFSDEVVE ILQHYQFPGN VRELENIIER AIVLCDGPVL ERRHLPRRLR SPRALQYETK TRDHLLPLAE LERQYIEDVL SIVGGNKKKA AEVLGIDRTT LWRKLKNQNE TS
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