| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0691 |
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| Symbol | |
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| ID | 8418504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 823311 |
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| End bp | 826892 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037255 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate- binding |
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| Protein accession | YP_003197561 |
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| Protein GI | 258404819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.145468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA AAGACGAGAA GCAAGCACAA CCGAAGAAAA AACAGGGCGG GAGCGGGAAG
GATCCTGTGA AGGAAAAGCT CATCCTGACC GGAGCCGATA TCGTGCATAT CGGTGAAGAG
GCCGAACTCC TCGTTGGAGG CAAGAATTAT AACACTGCGA TTATCAGTGA GCTGGAAGAT
GTCCGGGCCC CGCAATTTCG GGCCATTTCA GCCAAAGCAT TCCACAAGCA TCTAGACGAA
AGCAAAGTCA ACGCCACGCT CGTGCGCTCC ATCGTCAATC AGGAATACGA TCAGACCGAT
TGGAGCGACC ATGAAATCAA TAAAGATCCT GATTTTTTGA AGAAATTCGT TCGCAACGTT
GCCGAGAAGG TCCGGGAGGC CCAATCGAAG CCCGCGGGCA GCAGCCTGAT CCAGTTGCGC
AAGTTCATCA ATAATGTCGT TGAAGGGTTC GCGACCTCCC CGGAAGGTAT CGACCAACTC
CGTAAACGTT CCATCCTGGT CCAGGTCGCC ATTTTGTCCG TGAAACTGCC CGACGAGGTG
CACGCGGCCG TGGCCCAGGC TTACCGGGAC ATCTGCAAGG AAGCCGGATT GGAAAACGTG
CCTGTGGCAG TGCGTTCCTC TGCGGCCGGA GAGGACAGCC GGAAAAAAGC CTTTGCCGGA
CTCCAGGACA CCTATCTGAA TATTGTCGAC GCCGAGCATT GTGTCGAAGC CTACCATTGG
GACTGCGCTT CAGCCTATAA CCTGCGCAGC ATGACCTACC GCCGTGAGGC CATCCTCGAC
GCCGTGAACC AGGCGGAGCG CACCGGAGAC GACTCCATCG CTACCCAGGC CAAGGAGGAG
TGGGCCATTG AAAACACCTC CTTGTCCGTG TGCATCATGC GCATGATCAA CCCGGTCATC
TCCGGGACCG CCTTCAGCGC AGACACCGCC ACGGGATGCC GGGGGACCGA CCGCAACGAT
CTCGTTTCCA TGGATGCCAG TTATGGCCTT GGCGAGGCCG TGGTCGGGGG GATGGTCACC
CCGGATAAAT TCTATGTCTT TCAGCGCGAC GGCGCCTCGG AAGTCGTGGT CCGCTATATG
GGCTGTAAGG ACAAAAAGAT TATCTATGAT GAAGACAAGG GCGGCACCAA ACTCGTTGAG
GTCGCCGAGG ACGAGGTCTA CCGCTGGTCG TTGTCCCTGG CCCAGGCCGA GGAGGTCGCC
CACGGGGTCC GGGCCATCAG CCGAGCCTAC GACGACATGA TCATGGATAC GGAATTTTGT
ATCGATAAGT GGGACCGGCT GTGGTTCGTC CAGGCCCGAC CTGAGACACG CTGGAACGAA
GAATTTGAAA AGCATCCCCA CACCATCTAT ATGCGCCGCC TTGAGGTCGA TCCCCAGGCG
CTGAACAATG CCGAAGTCGT GATTACCGGC AATGGGGCTT CCCGCGGCGC CGGACAGGGC
ACGGTCCGCT TCCTGCGTTC TGCCCTGGAA CTGAACAAGA TCCAGCCCGG CGATATCCTG
GCCGCGGAAC GCACCGATCC GGATATGGTG CCGGGAATGC GCATCGCCTC GGCCATTTTG
GCCGATGCAG GAGGCGATAC CAGCCACGCG GCCATCACTT CCCGTGAACT GGGCATCCCT
GCCGTGATCG GCATCAAACG TCTGGAGATC CTGCGCGCCC TGGACGGGCG GGAAGTCACT
GTCGACGGCT CCCGCGGACA AGCCTACCGC GGCAAGATGC CCCTGATCGA AGTTGGCGGC
GAAATCGACG TCAGCCAGTT GCCGCAGACC AAGACCAAGG TCGGGCTGAT CCTTGCCGAT
GTGGGACAGG CCCTCTTTCT GTCCCGGCTG CGTGAATCCA AGGATTTCGA AGTCGGCCTG
CTGCGGGCCG AATTCATGCT CGGCAATATT GGTGTCCACC CTCTGGCCCT GGAAGCCTAC
GATAACGGCA CCCTGGGCAA TGTCGTCGAT ACCCGGCTTG AAGAACTCGA GGGACAGCTG
ACCAAGATCC TCAAGGACCA ATTGGCCAGC GGCGTTTTGA GTTTCGAGCT CAAGCTGCGC
AATTATGTGG GGATCATCAC CGGCCTGGCC GAACAGATGG ACCGCCTCAG TGAAAACGAC
GGCGCTCGCG GCACGGAAGA GGTCCTGGCC GTGCACCGGC AGATGCGCGA GTTGGACAAG
CAACTCGATC AGCACCTGGA ATGGGCCACC CAGCGCATGG ACACCCTGAA GACCTCCACG
GATCTGCGAG AGCATGTGGC GGTGATCATG GGCTATACGG ATCAGCTGCT CCATCTGGCG
GGCAATGATC CGGAAACCAA GCGCAAGCGC GAAGAGATCA ACGAACGGAT CGAATCCCAG
GTCCGCAGGG TCCAGGATAA TCCGCACGTC CAGCAGACCT TGGAGCGTAT CGGCAATATG
CGGAGGGACA TGGCCCAGAA GGTTGGCCTT TTGCAACAGA TGGAGGATGT GCGGCATCTC
CAGGAAAACA TCCGGGAGAT CCTGCGTTCT CGTGGCTACC GCACCGGCAA AGAACTCTAC
GTCCAGACCC TGTCCCAGGG GCTGGCCCTG TTCGCCATGG CCTTTTACGG CCGGGAGATT
ATCTACCGGA CCACGGACTA TAAGACCAAC GAATACCGCA ACCTTCTCGG CGGGACGCTG
TTCGAGGGAC ATGAGGACAA CCCCATGATC GGCTACCGCG GTGTGTCCCG CAACCTCCAC
GATTGGGAAC TGGAGGCCTT CAAGCTGGCC CGCGGCGTGT TCGGCGGCCG GAATCTGAAT
CTGATGCTGC CCTTTGTGCG GACCCTGGAA GAGGCCCGGT CCATGCGCCG CTACATGAGC
GACGTGCACA ACCTGCGTTC CGGACAGGAC GACCTGAAGG TCATTCTCAT GTCCGAGATC
CCGAGTAATG CGGTCCTGGC CAAGCAGTTC ATCGAGGAAT TCGACGGATT CTCCATCGGA
TCCAATGACA TGACGCAGCT GACCCTGGGC ACGGACCGGG ACAACGCCAT GCTGCGCAAT
GTCTATGACG AGGAGGACCC GGCCGTTGTC TGGGCTATCC TGGTCACGGT CTTCACCGGG
CAGAAATACG GCAAGAAGGT CGGCTTTTGC GGCCAGGGCG TCTCCAATTC CACCATTCTG
CGCGGCTTGG TGTGTATCGC CGGTATCGTC TCCGCTTCAG TCGTGCCCGA CACCTACCCG
CAGACCAAGT ACGATATTGC GGCTATTGAG AAGGAGGAAC TCCGGGTACG TGATCTCGGC
AGTTGGCTCA AAAAACAGCA TCTCAATGAG CTCAAGCAAA TGCTCCAGGA CCACCACTAT
GGGCATATTC TGAAGAAAAA CAGTACGGCA GAAGATCTGA TGGAGTGGTA CGAGGGCGAA
CTCGCCCGCT TGCACGAGCA GTTGCAGTCC GCCCTGGGGC AGAGCAAGGA AGGTTTTTAC
CGTCAGGAAC TCGAACGGTT CCGGAGCACG TTCCACAAGC CGGTCATCTA TGCCAATTGG
GATTGGGACA CTACGGTCAG CGATGCCCTG CATCAGGCCG GATTCGCCAA TTTTGAAGAG
CAGGAGGCCG CCCTGGACGA GCAGCGCAAG AAAACCTGGT AA
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| Protein sequence | MAEKDEKQAQ PKKKQGGSGK DPVKEKLILT GADIVHIGEE AELLVGGKNY NTAIISELED
VRAPQFRAIS AKAFHKHLDE SKVNATLVRS IVNQEYDQTD WSDHEINKDP DFLKKFVRNV
AEKVREAQSK PAGSSLIQLR KFINNVVEGF ATSPEGIDQL RKRSILVQVA ILSVKLPDEV
HAAVAQAYRD ICKEAGLENV PVAVRSSAAG EDSRKKAFAG LQDTYLNIVD AEHCVEAYHW
DCASAYNLRS MTYRREAILD AVNQAERTGD DSIATQAKEE WAIENTSLSV CIMRMINPVI
SGTAFSADTA TGCRGTDRND LVSMDASYGL GEAVVGGMVT PDKFYVFQRD GASEVVVRYM
GCKDKKIIYD EDKGGTKLVE VAEDEVYRWS LSLAQAEEVA HGVRAISRAY DDMIMDTEFC
IDKWDRLWFV QARPETRWNE EFEKHPHTIY MRRLEVDPQA LNNAEVVITG NGASRGAGQG
TVRFLRSALE LNKIQPGDIL AAERTDPDMV PGMRIASAIL ADAGGDTSHA AITSRELGIP
AVIGIKRLEI LRALDGREVT VDGSRGQAYR GKMPLIEVGG EIDVSQLPQT KTKVGLILAD
VGQALFLSRL RESKDFEVGL LRAEFMLGNI GVHPLALEAY DNGTLGNVVD TRLEELEGQL
TKILKDQLAS GVLSFELKLR NYVGIITGLA EQMDRLSEND GARGTEEVLA VHRQMRELDK
QLDQHLEWAT QRMDTLKTST DLREHVAVIM GYTDQLLHLA GNDPETKRKR EEINERIESQ
VRRVQDNPHV QQTLERIGNM RRDMAQKVGL LQQMEDVRHL QENIREILRS RGYRTGKELY
VQTLSQGLAL FAMAFYGREI IYRTTDYKTN EYRNLLGGTL FEGHEDNPMI GYRGVSRNLH
DWELEAFKLA RGVFGGRNLN LMLPFVRTLE EARSMRRYMS DVHNLRSGQD DLKVILMSEI
PSNAVLAKQF IEEFDGFSIG SNDMTQLTLG TDRDNAMLRN VYDEEDPAVV WAILVTVFTG
QKYGKKVGFC GQGVSNSTIL RGLVCIAGIV SASVVPDTYP QTKYDIAAIE KEELRVRDLG
SWLKKQHLNE LKQMLQDHHY GHILKKNSTA EDLMEWYEGE LARLHEQLQS ALGQSKEGFY
RQELERFRST FHKPVIYANW DWDTTVSDAL HQAGFANFEE QEAALDEQRK KTW
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