| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0628 |
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| Symbol | |
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| ID | 8418440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 754669 |
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| End bp | 755175 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 645037193 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003197500 |
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| Protein GI | 258404758 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0492452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000131478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAGA GTTTAAGAAA TTTATTTATT GATTTTATTG ATAAAAATGA AAATTCAGAT
GTTGATTCGT TTTTTAAAAA AATGCTTACT TTGGCCGAAG AAAGTCAAGA TCCTGCTCAA
GTCCACAATA TTATTGGTAA GGAGTTTTTC TCGCGAGGCT ATATTGAGCA AGCACTTATT
CATTTCGAAC AATCTGTAAA GTATGATTCA AAAGAAAAAG AATATTTAGA AAATTTAGGG
TTATCATATT ACAGCTTGCA AATGATAGAA AAGGCTTATA GTTATTTTTA TCGCGTTTAT
AAATTAGATG TAAATGATTT AAATGCTGTT CAAAATTTAG CTTTGTTGTC CAATGAAATG
GGTTTTCATC ATCAATCAGC ATTTTATTTA GAAAAGCTGC TTATAGAAAC ATCAGAAGCC
GGTAGCGAAT TGTTGAATTT ATATATAAAT ACATTATATA TATTAGATCC GAGTTTTGTT
TCTGAGGATT TGCTTCTTTG TGTTTAA
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| Protein sequence | MEKSLRNLFI DFIDKNENSD VDSFFKKMLT LAEESQDPAQ VHNIIGKEFF SRGYIEQALI
HFEQSVKYDS KEKEYLENLG LSYYSLQMIE KAYSYFYRVY KLDVNDLNAV QNLALLSNEM
GFHHQSAFYL EKLLIETSEA GSELLNLYIN TLYILDPSFV SEDLLLCV
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