Gene Dret_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0600 
Symbol 
ID8418412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp722079 
End bp722342 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content56% 
IMG OID645037168 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_003197475 
Protein GI258404733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AAATCGATGG CGACCCGCGC ATAACCCAAC TTCAGGGGCC TCGAAAGGCC 
AACCGGATTC AGGAAGTGCC CAAGCCGGAA AAAAGCCAGC CCAGTGACAG TGTCCAACTT
TCTGCCGATG TGCAGCAGGC GTCGGAAACG GAGCGCGCCG CGCGTGTCCA AGAGCTTAAG
GCGCAAGTAG AAAACGGTAC CTACCAGCCG GATATGAACA AGGTGGCGGC CAGTTTGCTG
ACACACATCG CTAAGGGAGA ATAG
 
Protein sequence
MTIKIDGDPR ITQLQGPRKA NRIQEVPKPE KSQPSDSVQL SADVQQASET ERAARVQELK 
AQVENGTYQP DMNKVAASLL THIAKGE