| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0578 |
|---|
| Symbol | |
|---|
| ID | 8418390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 702670 |
|---|
| End bp | 703455 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645037146 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_003197453 |
|---|
| Protein GI | 258404711 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1291] Flagellar motor component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TGGATCTAGC GACTTTTCTT GGCATCATCG GCGCCTTCGG CCTGATGGGG
TATGCCATCA TGTCCGGTAG CGGCCTGGAA GTCTTCATTG ATTACCAGGC GCTTTTTGTT
GTCACCGGCG GAACTTTTGG CGCCCTGCTG GTGCACTATC CGCTACGAGA TGTGGCCAAC
GCATTTTCTG TGGGCAAAAA CGCCTTTTTG TACCGCGAAG CCGCCCCCAA CGAAGTTATG
GCCATGCTGC TGGATTATGC CACTCGGGCC CGCAAAGAGG GACTCTTAGC CCTTGAGCAG
GCCACCAACG AGGCCTCTGA CAATTTTTTG GCCAAAGGAT TGCAAATGGC TGCCGACGGC
TACGAGCCGG ATGTGCTCCG CGATACCCTG GATCGGGAAA TTGAGTATAT TGAGGATCGC
CACGAAAAGG GTGCAGAAAT TTTCTCTTCG CTGGGCATGT ACGCCCCGGC GATGGGCATG
GTCGGAACCC TCATCGGTTT GGTGCAGATG CTGCAGACCT TGGAGGATCC ATCAACTATC
GGCCCAGCCA TGGCCATGGC CCTTTTGACT ACATTGTACG GCTCCGTCAT GGCCAACGTC
ATCTTCATCC CTATGTCCGG GAAGCTTAAA AATAAATCCA AAGCGGAGGT GCTCAAAAAA
TCCTTGGTAC TCGAGGGGAT GAAATCAATT TTATTAGGCG AGAATCCGCG GATTATGGAA
CAAAAACTTC ATGCCTTCTT GGCGCCCAAA CAGCGGGAGA GCGCTTCGAA TAAGCGAAAA
CGCTAA
|
|---|
| Protein sequence | MKTLDLATFL GIIGAFGLMG YAIMSGSGLE VFIDYQALFV VTGGTFGALL VHYPLRDVAN
AFSVGKNAFL YREAAPNEVM AMLLDYATRA RKEGLLALEQ ATNEASDNFL AKGLQMAADG
YEPDVLRDTL DREIEYIEDR HEKGAEIFSS LGMYAPAMGM VGTLIGLVQM LQTLEDPSTI
GPAMAMALLT TLYGSVMANV IFIPMSGKLK NKSKAEVLKK SLVLEGMKSI LLGENPRIME
QKLHAFLAPK QRESASNKRK R
|
|---|
| |