Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0568 |
Symbol | |
ID | 8418380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 689958 |
End bp | 691427 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645037136 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003197443 |
Protein GI | 258404701 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAC CCTCCTCCCA GCACACTCTA ATCATTACCG ACAACCACGC CGAAGGGGAT CGGCTCAAAG AAGTATTGCG TCAGCTCTTA CCCGGAACAA TCACCATAAT GCCTCTATCC ACGCCGCACT ACAGGGTGTT GCGCGAACAA AATCCAGACT TGCTGCTTGT CGCCCTCCAG CAGGAAAACC CCTCCGGCTT AAGACATCTG CATCGCTTCC ACACGGAAAA AGAGAATAGC CTGTCTATTG CCATCGTGCC TGAAGGAGAT CGTGAACTAA CGATTGAAGC CATGCATTCC GGGGCTCAGG CCCATATAGC TTCGCCTCTG CATCCGGAAG AGGTCGAGCT CGTCGTTTCT CGAGTAATGC CCCGCACTCA TCTCGTCAGC AAATCAGAAA TACCGGCCCC AAAGCTCCGA GAAAGTGATG GTTTCCACGG CATAGTCGGC AACACCACCG TCATGCGTGA ACTTTTTGAC CTCATCGATC GCATCGGCGA GGAAGGGGAG AGCACGATCC TGCTGCAAGG GGAAAGTGGG GTCGGTAAAG AATTGGTCGC TCAGGCGCTG CACGCCTGCA GTCCACGCGC CGGGCACAAT TTTGTCCCCG TCAATTGCGC GGCCATTCCG GACAGCCTTC TGGAAAGCGA ACTCTTCGGC TATGAGAAAG GCGCTTTCAC TGGCGCGACC CAGGCGAAGA AAGGACGCTT CCAACACGCA AACGGCGGGA CTCTGTTTCT CGATGAAATC GGAGAAATGC GGCCGGAGTT GCAGGCCAAG CTTCTGCGGG TCCTGCAGGA AAAAGAATTC GAACCTGTCG GCGGCATGAA GCCGGTCCAG GCTGATGTGC GCGTCATTGC CGCCACGAAT ATCAACCTTG AACTGGCAGT CAACGAAGGC CGGTTCCGCA CCGATCTCTA CTACCGGCTC AATGTGGTAC CCTTAGAAAT ACCGCCGCTC AGGGATCGGG TTGAAGACAT ACCGCTTCTG CTCGACAAAT TCACCCGGCT GTTCAACAGG GGCAAGCAAT CACAACCGAA GCGGTTTTCG GCCAATGCGC TCAAGGCGCT TCAGGAGTAT CCATGGCCGG GTAATGTCCG GGAACTCAAA AATATCGTCC AGCGCTTGTG TGTCCTGCAC CGCAAAGCAG TGGTCAGGGT CCAGGACCTC CCGCCCCAAA TCGTCTCCGA TCCGGAACTG CTTCATACCC CCGAGGAGGA GGAGGAAGAG GCCCTTTCCG CGGCTGTGCA AGATCTTCCG GACATGCCGG ATATGGAAGA GGAAACCGAT TTCAATACCC GGGTCAGCGA ATTTGAAGAC CGCCTTATCC TGCAAGCGCT GATCGCCACC AATGGGAACA AAAAACAAGC AGCGGAAAAA TTGAATCTCA AACGCACGAC CCTTCTTGAA AAAATCAAGA AGAAACAGCT TGATAAAGTC TTCAACTCCC TGCAGAAAAA GCAGGCCTGA
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Protein sequence | MNIPSSQHTL IITDNHAEGD RLKEVLRQLL PGTITIMPLS TPHYRVLREQ NPDLLLVALQ QENPSGLRHL HRFHTEKENS LSIAIVPEGD RELTIEAMHS GAQAHIASPL HPEEVELVVS RVMPRTHLVS KSEIPAPKLR ESDGFHGIVG NTTVMRELFD LIDRIGEEGE STILLQGESG VGKELVAQAL HACSPRAGHN FVPVNCAAIP DSLLESELFG YEKGAFTGAT QAKKGRFQHA NGGTLFLDEI GEMRPELQAK LLRVLQEKEF EPVGGMKPVQ ADVRVIAATN INLELAVNEG RFRTDLYYRL NVVPLEIPPL RDRVEDIPLL LDKFTRLFNR GKQSQPKRFS ANALKALQEY PWPGNVRELK NIVQRLCVLH RKAVVRVQDL PPQIVSDPEL LHTPEEEEEE ALSAAVQDLP DMPDMEEETD FNTRVSEFED RLILQALIAT NGNKKQAAEK LNLKRTTLLE KIKKKQLDKV FNSLQKKQA
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