Gene Dret_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0546 
Symbol 
ID8418356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp656324 
End bp656917 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID645037112 
Producthypothetical protein 
Protein accessionYP_003197421 
Protein GI258404679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTGG GTGTGCAGAC TATCAGGACC ACGGTCCAAT GCTGGCTTTT CGTGGCGATC 
CTGACCGCGT GTGTTGCCGG TGGGGTCACG GCAGCGTTCG GGCAGCAATG GCAACTGGAC
AACCTCGTCC TGGACAGCAG CCAAGGCGGT CACGTTCGGG TGCGGTTCGG GGTGCAATGC
CCGGTTGAAC CGTTGAAGCA ATTGCTGACC GATGAGGGAG CGACGGTTCG GGTCGGCTTC
GAAGCCGCGT TGCGCCGGGA GCGGCTCCTG CTCTGGGAGA AGCAGGAGGC TGTGGCGCGG
CGGCTGTATT ATCTCAAAAG CCGGGCACTG AGTCAGGAAT ATGAGCTCAA GGGCGAAGGC
CTGAACAAGC CTTTGGTCGG AACCGAGCTT GCGCCCTTGC TGGACAAGGC CTGGTCGACC
CTGGAAATGG ACCTGGGGGC GTGGCACCAA CTCCAGCCCG GTTCCGAGTA TGTTGTCGAC
TTGCGAATAG AATGTGATCG GGCCGATGTC CCGGTCTGGC TGCGGCGGGC CCTGTTCTTC
TGGTCCTGGG ATGTCCTGCC GCCGCGGACA TATAGACTGC GCTTCAGGTA TTGA
 
Protein sequence
MKVGVQTIRT TVQCWLFVAI LTACVAGGVT AAFGQQWQLD NLVLDSSQGG HVRVRFGVQC 
PVEPLKQLLT DEGATVRVGF EAALRRERLL LWEKQEAVAR RLYYLKSRAL SQEYELKGEG
LNKPLVGTEL APLLDKAWST LEMDLGAWHQ LQPGSEYVVD LRIECDRADV PVWLRRALFF
WSWDVLPPRT YRLRFRY