| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0511 |
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| Symbol | |
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| ID | 8418319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 621055 |
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| End bp | 621648 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037075 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | YP_003197386 |
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| Protein GI | 258404644 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.1021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTAC CTATTGTCAT TGAATCCACG GGACGCGGGG AACGCGCCTA TGATATATAT
TCCCGGCTTC TTAAAGACCG GATCATCCTG CTGGGCACCC CGATCGACGA CAACGTGGCG
AATCTGATCT GCGCCCAGCT TCTTTTCCTG GAATCGGAAA ACCCGGACAA GGAAATCAAT
TTTTACATCA ACAGCCCGGG AGGCTCCGTG ACCTCGGGGT TAGCGATTTA TGACACCATG
CAATACATTT CCGCTCCCGT AGCGACCTTG TGCCTGGGGC AGGCTGCCAG CATGGGCGCC
GTGCTCCTCG CTGCCGGCGA ACCCGGAATG CGCTATGCCC TGCCGCACGG GCGGATCATG
CTCCACCAGC CCATGGGTGG GTTTCAAGGT CAGGCCACCG ATATCGATAT CCAGGCCCGG
GAAATCCTGC GGTTGAAGAG TTCCTTGAAT TCGATCCTCT CCCGGCATAC CGGGGTGGAG
CTGGAAAAGA TGGAACGGGA CACTGATCGC GACTATTTCA TGGGCGCGAC CGAAGCCGCC
GATTATGGCG TGATCGACCA AGTATTGGCG TCGCGGCGGG AAATGACCGG ATAG
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| Protein sequence | MNVPIVIEST GRGERAYDIY SRLLKDRIIL LGTPIDDNVA NLICAQLLFL ESENPDKEIN
FYINSPGGSV TSGLAIYDTM QYISAPVATL CLGQAASMGA VLLAAGEPGM RYALPHGRIM
LHQPMGGFQG QATDIDIQAR EILRLKSSLN SILSRHTGVE LEKMERDTDR DYFMGATEAA
DYGVIDQVLA SRREMTG
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