Gene Dret_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0442 
Symbol 
ID8418247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp545053 
End bp545925 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID645037003 
ProductCobyrinic acid ac-diamide synthase 
Protein accessionYP_003197317 
Protein GI258404575 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.278106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CCATTGCCAG CGGCAAGGGA GGCACGGGGA AAACAACCGT GACCACCAAC 
CTCGCCGCAT ATGTATCCCA AAACACCCAT GGAGTGTCGC TTGTCGACTG CGACGTCGAA
GAGCCCAACG CCCAATTTTT TCTCGATGCC CACTGGGAAT ACGAGGAAGC ACAACATGTC
CCTGTTCCCG CCATTGACCA GGAAACCTGC CTTGGAAGCG AGTGCCGGCA ATGTGTCGAG
GCCTGTCGCT TCAAGGCCCT GATCTGGATG GTCGATGAAG TCATGGTCTT TCCGGAACTC
TGCCACAGTT GCGGCCTGTG CGAGACCATC TGCCCCGTCG GGGCTGTCGG CCAGAGCCAT
CGCACCATTG GCGACGTCAG ACAGGGCAGC GGTCACGGCG TAACGCTGAC CGGCGGTCTG
ATGCGCGTCG GCGAAGCCAT GGCGCCTCCC TTGATCCAGC GGGTTAAAGC CAAGGCCCCG
GAAACGGCCG AGGTGACCAT ATACGACTGC CCGCCCGGCA CATCCTGTCC GGTTATCGAA
GCCCTGGACG GGGCCGACTA CACCGTGCTG GTCACCGAAC CCACGCCGTT TGGTCTCTAT
GACCTCCAAT TGGCGGTCGG CCTGCTGCGC AAACTGGGCA AACCGTTCGG GGTCGTGCTC
AACCGTGACG GCATGGGCGA TGACCGGGTC TTGGACTACC TTGAGGCCGA AGGGATTGAT
CTTCTGGCCC GCCTGCCCCA CAGCACCGAG GCGGCCGCAG CATACTCCAG GGGCGAACTC
CTCGTTGAGG CGCTGCCTGA AATGCAACAA GCCTACGCGG ATCTGTGGTC AGGGATTGTG
GAACACATGG CGGCGGAAAA GGAAACGGTA TGA
 
Protein sequence
MRIAIASGKG GTGKTTVTTN LAAYVSQNTH GVSLVDCDVE EPNAQFFLDA HWEYEEAQHV 
PVPAIDQETC LGSECRQCVE ACRFKALIWM VDEVMVFPEL CHSCGLCETI CPVGAVGQSH
RTIGDVRQGS GHGVTLTGGL MRVGEAMAPP LIQRVKAKAP ETAEVTIYDC PPGTSCPVIE
ALDGADYTVL VTEPTPFGLY DLQLAVGLLR KLGKPFGVVL NRDGMGDDRV LDYLEAEGID
LLARLPHSTE AAAAYSRGEL LVEALPEMQQ AYADLWSGIV EHMAAEKETV