Gene Dret_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0435 
Symbol 
ID8418240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp537831 
End bp538490 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID645036996 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003197310 
Protein GI258404568 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGTA TTCCTTGCAT CCAGGGAATA ATTTTCGCCT TTGGGGGAAC CCTGGCGCAA 
ATCCCCCTGG ACACGACGCA GATGCACAAA AAGGCCGCGG CGATTGCCGC GGCCTTTGAT
ATTGCCCTTC CTCAAGCGCC TACAATCTGG GCGGCAGTGG ACCGCGCCCG GGACTTGCTG
GTCCAGACCG ACCGCCAGAC GGCCCTGGAA TTTCACACCA GGTGCCGCTT TGCCCTGCTG
GAAACGGAAA TGGCCGTCGC AGCGCAGACC CGGCTTTTGG CCCCGGTCTC CTCGTTGCTT
CAGGACCTCG CAGACCAGGG ACTGACAGTC GGGGTTGTCA CGTTGGCGTC TCTTCCTTTT
GTCGAGGCGG TTGTTCCGCA GGACGCCTTT CGCGTGGCCC AATGGTTGAC CCGGGAGGCC
GTGACTCCAC CAAAACCCGA CCCCGCCCCC TATCTCCAAT TTCTGGACGC CCACCATCTC
GACCCGGCCC GGACTCTCGC CGTCGGTACC CGGTCTCTGG ATTTTCAGGG ACCACACCAA
CTTGGCTGCA GGATAGCCCA AGCTGGGAGT CCGACGGCTG CTGGAGCTGA CTTCATTGTC
CCCGCCATCA CCGACCTCCC CGCCCTGGTG GTCCCAAAAG GGTCCTGCCG GGATTCCTGA
 
Protein sequence
MSSIPCIQGI IFAFGGTLAQ IPLDTTQMHK KAAAIAAAFD IALPQAPTIW AAVDRARDLL 
VQTDRQTALE FHTRCRFALL ETEMAVAAQT RLLAPVSSLL QDLADQGLTV GVVTLASLPF
VEAVVPQDAF RVAQWLTREA VTPPKPDPAP YLQFLDAHHL DPARTLAVGT RSLDFQGPHQ
LGCRIAQAGS PTAAGADFIV PAITDLPALV VPKGSCRDS