Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0430 |
Symbol | |
ID | 8418235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 528748 |
End bp | 529905 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645036991 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003197305 |
Protein GI | 258404563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.138711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.304103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTC GCCGCTCCCC AATGTACCTC TTTTTGCTCG TCCTGACCGT GTCCGTGTGG GCTGGGTTTC AGGGCTGGCG GACGCTTTTG AACAATTTCG CCGTTGAGGT CGCCCACCTC GGCGGGCACC ACATGGGCGT CATCCAATCG GTCCGCGAGG TCCCGGGGTT TCTCGCTCTG CTGGTCATTT ATATCCTGCT GATCGTCAAA GAACACCGCT TGGCCGCGGT TTCCGTACTC ATCCTCGGCC TCGGCGTGGT CCTGACCGGA TTTTTTCCCT CGTTCTGGGG CGTTCTGCTG GCCACTTTGC TCATGTCCTT CGGCTTCCAC TATTTTGAAA CCGTCAACCA GTCCCTGACA CTGCAATACT TCTCCGTGGG CGACGCCCCG CTCGTTTTCG GTCGATTGCG CGCAATCGGC GCTGCGACCA GTATCGGCGT CGGCCTCTCC ATCTTCGCCC TGGCCAACTG GCTGCCCTAT AAGCTCCTTT TTGCCCTGCT GGGCTGCATC AGCATTGCCG GCGCCATGTG GTGCCTGTTC CAGGACCCCA CGGACACCAA TATGCCGTCG CAGAACAAGC ATATGGTCCT GCGGCGGCGG TACTGGCTCT TTTACACCCT GACCCTGCTC GCCGGGGCCC GGCGGCAGAT CTTCATCGCC TTCGCCGTAT TCTTGCTCGT GGAGAAATTC GGACTCAGCG TCCAGGAGAT CACCTTGTTG TTCGTGGCCA ACCAGGCCCT GAACTACTTT GTCAGCCCCC TGGTCGGACG GGCCATCAAC CATTTTGGCG AACGCTCGGT CTTGAGCGTG GAATACGCCT CGCTCATCGT CGTCTTCCTG GTTTACGCCC TCAGCGATTC CCAATGGCTG GTCCTGGCCA TGTATATCGT GGACCACGTG GTTTTCAATT GCGCCATGGC CATCCGGACC TTTTTCCAGA AAATCGGGGA TCCCGGTGAC ATCGCCCCGA GCATGGCCGT CGGCTTTACC ATCAACCATA TCGCGGCGGT GCTCATTCCG GCCGCAGCCG GCCTGATCTG GCTCGTCGAC CCCGCCTGGG TTTTTCTCGG TGGCGTGGGG TTGAGCCTGT GCTCGCTGCT CCTGGTCCAG GCCATCCCCT GGCAGCTCAA AAGAAGCCGC ACCGCTTCAT CCGGTTAG
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Protein sequence | MSFRRSPMYL FLLVLTVSVW AGFQGWRTLL NNFAVEVAHL GGHHMGVIQS VREVPGFLAL LVIYILLIVK EHRLAAVSVL ILGLGVVLTG FFPSFWGVLL ATLLMSFGFH YFETVNQSLT LQYFSVGDAP LVFGRLRAIG AATSIGVGLS IFALANWLPY KLLFALLGCI SIAGAMWCLF QDPTDTNMPS QNKHMVLRRR YWLFYTLTLL AGARRQIFIA FAVFLLVEKF GLSVQEITLL FVANQALNYF VSPLVGRAIN HFGERSVLSV EYASLIVVFL VYALSDSQWL VLAMYIVDHV VFNCAMAIRT FFQKIGDPGD IAPSMAVGFT INHIAAVLIP AAAGLIWLVD PAWVFLGGVG LSLCSLLLVQ AIPWQLKRSR TASSG
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