| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0373 |
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| Symbol | |
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| ID | 8418178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 458627 |
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| End bp | 459853 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645036938 |
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| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
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| Protein accession | YP_003197252 |
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| Protein GI | 258404510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000384224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTGT CCCAGTTAAC CAAATTGACG CTGGATATTC AAGGATTTCG TGTCGGTCGA
GTTCAAGGTG ATACGAGCGG GATCACCGTA GATATAGCCC CGGACCGGCG TCATCTGCTC
TTTTGCAGCC GCTGCGGCAG CGCTGCCAAG TATCGGGATA CCCTTAAAAG CCGCTATTTT
CGCCATGTCC CTCTTTGGGG AATCCCTGTA TGGCTCAGGT ACAGCCCCCG CAGAGTTCGG
TGCGGACATT GCGGCATCAA GGTGGAGTAT TTCCCCTGGA GCACTGGCAA ACATCGGTTC
ACAACGGCTT TTGCCCACTT CCTGGCTTCA TGGGCCAGAT TACTGCCCTG GAAACATGTG
GCGCAGCTTT TTGGCTGCTC CTGGGGCACC GTAGCCGCTG CAGTTGCCCA GATGGTCGAG
TATGGTTTGG ACCACCAAGA CCTGTCGAAT CTGACCCACA TTGGGATTGA CGAAATCTCC
CGAGAAAAGG GCCAAGTATA CCTAACCAAT GTCTACGACC TAAATACCTC CAGTCTCGTA
TGGAGTGGGG AAAAACGGAC AAAGGCAACA ATCACCAACT TCTTCACCTC GCTTGGTCCT
AATAAGACCG ATAAGCTTGA AGGGGTCTGT TGCGACATGT GGGAACCGTA CGCCCAGGTT
ATACGAGAAA TGGCCCCGAA ATCGACGATG GTCTTCGACA AATTCCACAT TGTCCGGCAT
CTCAACGAAG CCGTTGATCA GGTCCGCAGA GACGAGATCC GGGAAAAGGG CCAAAAGCAC
AAGGACCTGG TTAAAGACAC CCGGTATATC TGGCTCAAGA ACCCGTGGAA TCTGACTGAC
AAGCAGGCAT CTCGGTTGAG CGCACTGGAA AAACTCAATC TCAAAATCAA CAGGGCGTAT
TTACTCAAGG AATCATTCCG CCAGTTCTGG TCGTATGAGT GCAGAGCTTC AGCCAAAGAG
TTCCTCGACA AGTGGTTCTG GTGGGCGACA CATTCCAGGC TGAAGCCAAT GCGAAATTTT
GCTTGGATGC TGCGCCGCAA AGAAGAAAAT ATTCTCAGTT ATTTCGATAT GCCCATCAGC
AATGGCTCGG TGGAAGGCCT CAACAATAAG GCTAAGGTCA TCAGTCACAG AGCATACGGG
TTCAGATCAG CCAAGAATTA CATCCGGAAT CTGTACCATT GCATGGGCGG GCTCCCTGAA
CCCCAAATTA TGCACAGATT TGTGTGA
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| Protein sequence | MLVSQLTKLT LDIQGFRVGR VQGDTSGITV DIAPDRRHLL FCSRCGSAAK YRDTLKSRYF
RHVPLWGIPV WLRYSPRRVR CGHCGIKVEY FPWSTGKHRF TTAFAHFLAS WARLLPWKHV
AQLFGCSWGT VAAAVAQMVE YGLDHQDLSN LTHIGIDEIS REKGQVYLTN VYDLNTSSLV
WSGEKRTKAT ITNFFTSLGP NKTDKLEGVC CDMWEPYAQV IREMAPKSTM VFDKFHIVRH
LNEAVDQVRR DEIREKGQKH KDLVKDTRYI WLKNPWNLTD KQASRLSALE KLNLKINRAY
LLKESFRQFW SYECRASAKE FLDKWFWWAT HSRLKPMRNF AWMLRRKEEN ILSYFDMPIS
NGSVEGLNNK AKVISHRAYG FRSAKNYIRN LYHCMGGLPE PQIMHRFV
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