Gene Dret_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0352 
Symbol 
ID8418157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp438513 
End bp439820 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content61% 
IMG OID645036918 
ProductRadical SAM domain protein 
Protein accessionYP_003197232 
Protein GI258404490 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGT ATAAACGGGG GGCTGAGCGC TATGAAAAAA CCCGCCATCC CCTGCATTTC 
GGGGTCTTCC ATGAACTGCG CACCCCGGAG GCGACGCTCC ACTTCAATCT GAACCACGAA
ATCCTCCGAG CCCAGGGTCA CAGTGCCAAC TGGCCCTCGG AATTGGAATG GCTCAAGCGC
ACCCGGGGCA ACGACTGGGT TTACTACTCC ACCGGCGGAT ACGCAGGCAC GTACGAAACC
ATCGGCGAGA ATCTGCTGAC CGCGCCCATT TCCTTTCGCA TCCCCACGCC CTATAACGAA
GTGGTCAAAG CCACCGGGGA ATACTATCTG CCCAATGTGA CCTACCCCTC GAATGCGGTC
CTCGGCCATG ACCCCTTCGC CAATGCGGCA GTCCAAGACC TGATCGCCAA CTGGCCGGCG
ATTGTGGAGC GCGTTTGGGC CACGGCCGGG GACCTGCCGG ACGCGCATCA GGATGCGTTG
CACCAAGTAC GACAGAAGAC GCCCGAGGCG TTGCAGGCCG CGGCTGAGCG ATTTGCCGCA
ATCGCCGGCG GTCGTGTCAG CGTGTTGCCC CCGGACGCCC GCCATGTGGA CTACAACATC
CTGCCGCTGA CAGTGGCGGA CGGTTGCCGC TATAAATGCC GCTTTTGCAC CATCAAAAAC
CGCAAACCCT TCGCCCCCCG CAGCCAAAAG GAGATCAGCG ACCAGCTTGG CGCCCTGCGC
GACTGCTGCG GCCAAGACCT GGTCAACACC AACGCGGTCT TTTTCGGCGA GCACGACGCC
CTGAGCGCCC CGGCGGAGAT ACTGGAGTAC GCCGCCGCGA CCGCCCGGGA GACGCTCCAG
CCTGAGACCT CCTTTATGCA GGACTGGAAT TGCTTGTGCT TCGGCAGCGT CGATGGACTC
CTGGAAGCCT CGGACAGGTT TTTCCACCGC CTCAACGCCC TGGGCGCGAC CGTGTATATC
AATATCGGCT TCGAATCCGC GGACCAGGAA ACACTGGACA CCATCGGCAA ACCCCTGGGG
GTGGAGCAGG TCGAAGCCGC TTTCGCCCGC ATGCTGGATC TCAATGCGCG CTTTGCGAAC
ATTGAGATCA CCGGGAATTT CCTGATGGAC GACCAACTGC CCTCAGGCCA CTACCCCAGC
TTTTTGCGCC TGGTGCGCGA CTCCATTTCC GCCCCCAAAG GCAAGGGCAC CATCTACCTC
TCGCCGCTGA TGCACTCCAA CCCGAGTTCA AAAATGTTGT TCACCTTCAA TCAGCTCAAA
ACCCTCAGCC GCCTTCCCAC GTATCTCTAT CTCATCCAGC GGCTGTGA
 
Protein sequence
MTLYKRGAER YEKTRHPLHF GVFHELRTPE ATLHFNLNHE ILRAQGHSAN WPSELEWLKR 
TRGNDWVYYS TGGYAGTYET IGENLLTAPI SFRIPTPYNE VVKATGEYYL PNVTYPSNAV
LGHDPFANAA VQDLIANWPA IVERVWATAG DLPDAHQDAL HQVRQKTPEA LQAAAERFAA
IAGGRVSVLP PDARHVDYNI LPLTVADGCR YKCRFCTIKN RKPFAPRSQK EISDQLGALR
DCCGQDLVNT NAVFFGEHDA LSAPAEILEY AAATARETLQ PETSFMQDWN CLCFGSVDGL
LEASDRFFHR LNALGATVYI NIGFESADQE TLDTIGKPLG VEQVEAAFAR MLDLNARFAN
IEITGNFLMD DQLPSGHYPS FLRLVRDSIS APKGKGTIYL SPLMHSNPSS KMLFTFNQLK
TLSRLPTYLY LIQRL