Gene Dret_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0329 
Symbol 
ID8418133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp410939 
End bp412069 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content56% 
IMG OID645036894 
Productcyclopropane fatty acyl phospholipid synthase 
Protein accessionYP_003197209 
Protein GI258404467 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATG CACGACACAA ATGCGCAGAG CTACTCGAGC ACGCGGGCAT TACCCTGAAC 
GGTTCGGCTC CCTGGGACAT CCAGGTCCAT GACGACCGAT TGTATTGGCG GGTCCTGCGC
GATAAACACC TCGGCCTTGG AGAGGCCTAT ATGGATGGGT GGTGGGACTG TCAGCGTCTG
GACATGTGCA TTGACCGGAT TCTGCGTTCC GGCGTGCGCA AGGCAGCCAA TCGGAGCTTG
GCGCACGGGG CCCTGGCAGC CCTCAGTTTG CTCACCAATC GGCAGAAGCT TTCCCGGTCC
CGGCAGATCG CTGAGCACCA TTATGACCTG GACAACGATC TCTTTTTGTC GTTTCTCGAT
CCCTACAACC AGTACAGCTG CGGCTTTTTC AATGGCGACT GCAGCCTGGA AGAAGCCCAG
GAGACGAAAC TTGCTCTGAC ATGCCGGAAA CTTGAACTTT CCCGGGACGA CTCGCTTTTG
GATATCGGCT GTGGCTGGGG GGGCTTTGCC AAGTATGCGG CAGAGCACTT CGGCTGCCAT
GTCACCGGGG TCAATATTTC CGAGGAGCAA ATTGCGTTTG CCCGTCAGGA TTGCCAGGGA
CTGCCAGTGG ACATTGTCGA GCAGGACTAC CGCGACGTCA CCGACACCTA TGACAAAGTG
GTTTCCATTG GGATGTTCGA GCATGTGGGC CCCAAAAACT ATGAGAGCTT CATGCGTGTG
GTGCAGCGGT GTCTCAAAGA AGACGGTATT TTTCTCTTGC ACACCATTGG AAGCAACAAG
TCGCGACTGA ACGTCGACCC CTGGATCTCG AAATATATTT TCCCCAACGG GGTGTTGCCG
AGTGTCTCTC AGATCGGGCG GGCCGCTGAG CCCTATTTTA TCATGGAAGA TTGGCACAAT
CTCGGCCCGC ACTACGATAA GACGCTGATG GCCTGGAATA GTCGGTTCCA GGAGGCTTGG
CCCCGACTGC GGAAGAAATA TTCACGGCGT TTCAAACGGA TGTGGGAATA TTACCTCCAG
TCTTGTGCCG GGGCCTTTCG GTCGCGTTCC ATTCAATTGT GGCAGGTAGT GTTCAGCAAG
GGGCGGTGCC CGCAACCGGA ATGCCGTTTG GCGGTTCAAC AGGGGGACTG A
 
Protein sequence
MRYARHKCAE LLEHAGITLN GSAPWDIQVH DDRLYWRVLR DKHLGLGEAY MDGWWDCQRL 
DMCIDRILRS GVRKAANRSL AHGALAALSL LTNRQKLSRS RQIAEHHYDL DNDLFLSFLD
PYNQYSCGFF NGDCSLEEAQ ETKLALTCRK LELSRDDSLL DIGCGWGGFA KYAAEHFGCH
VTGVNISEEQ IAFARQDCQG LPVDIVEQDY RDVTDTYDKV VSIGMFEHVG PKNYESFMRV
VQRCLKEDGI FLLHTIGSNK SRLNVDPWIS KYIFPNGVLP SVSQIGRAAE PYFIMEDWHN
LGPHYDKTLM AWNSRFQEAW PRLRKKYSRR FKRMWEYYLQ SCAGAFRSRS IQLWQVVFSK
GRCPQPECRL AVQQGD