| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0185 |
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| Symbol | |
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| ID | 8417989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 235493 |
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| End bp | 236632 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645036750 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003197065 |
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| Protein GI | 258404323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTGGC GTCTTGTATT GGCGGGGCTC GTCGTTGTGT CCTGTCTCGG ATTTCCGGAA
GCGCCGGCGT GTGCCGAAAA GCAGGACCAG CCGACGCTGC ATGTCTTGAA CTGGAAGAAT
TATTTTCCCT TTGATCCAGA TATTCCTGAA GAAAAAGGGA TTTACGCCCG CTCAAAGGTC
TTGCAAGAGT TTGCCGCACG CCACGGGTGC CGTATTGAGG TCGATGAAGT GGTCAACGAG
ATAGAGTTGC GGGACCGCTT GCTGACCATG CAAGGGTATT ACGATGTCGT TGTCTATTCG
GCCTGTGATG TACAATACCT GCATAAAGCC GGCCTGTTGC GTTCGATTCC TCGGGAGCAA
CTTGCTCACT TACCGCAGGT GGCAAAGGCC TATCTCAAGG TGAATTCAGC TTTAAACGGG
CTGTATTTCG TGCCGTATCT CTCCGGGACC ACAGGGATTA TCTACAGGCG TGATCTGCTT
GATCAACCGC CGGTTTCCTG GGAGGACTAT TTCAAACCAA AGGCTTCCTT GCAGGGGCGG
ATCGGGGCTC TGGATTCGGC CTACTCCATG TTTTTATGTG CTTTTGAGCA CTTGGGGTTT
GGAAAATTGC GGGAGGATCC GTCGTTGCTG CAGCAGGCTG CTGATCTGCT GCGCGGGATG
GAACGCCGGC AGATGTGGGA GGTTATCACC TCGGACCATG TCTATCTGGA AAAGCTACTT
GGCCAGGGGC AGATCTGGAT GACGATCGGG TATTCCGGGG CCGCGGCCCG TATGCAGCGC
AAATGGGGAG CTGAGCGCAT CGGCTACGCC CTTCCGACCG AGGGGGCGGA GATTTGGGGA
GATGGATTTA TTATTCCGCG CGGTGTGCGC CACCCCCAAT TGGCGTATGC GTTTATTGAT
TACATGATCA GCCCCGAGGT CCAGTATGAG GCGGCGCGGA ATCTGCTCTA CATCCCCGCA
AATGCCCGGG CGGCCGAAAA AATCAGCGGT GGGGGGCTGC TGCCTTCAGG CGATCCCCTG
CTGCACATCC CCCTGGGGAT GTACCCTGTC TTGAGCCGCG CGGATATCAC CTCGTCACAC
ATGGAAGGGA TGTGGCGCGA TATCGTCTCC AAGCACCATT CCCATCCCCC CGGCCAATGA
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| Protein sequence | MVWRLVLAGL VVVSCLGFPE APACAEKQDQ PTLHVLNWKN YFPFDPDIPE EKGIYARSKV
LQEFAARHGC RIEVDEVVNE IELRDRLLTM QGYYDVVVYS ACDVQYLHKA GLLRSIPREQ
LAHLPQVAKA YLKVNSALNG LYFVPYLSGT TGIIYRRDLL DQPPVSWEDY FKPKASLQGR
IGALDSAYSM FLCAFEHLGF GKLREDPSLL QQAADLLRGM ERRQMWEVIT SDHVYLEKLL
GQGQIWMTIG YSGAAARMQR KWGAERIGYA LPTEGAEIWG DGFIIPRGVR HPQLAYAFID
YMISPEVQYE AARNLLYIPA NARAAEKISG GGLLPSGDPL LHIPLGMYPV LSRADITSSH
MEGMWRDIVS KHHSHPPGQ
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