| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0178 |
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| Symbol | |
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| ID | 8417982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 226313 |
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| End bp | 227356 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036743 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003197058 |
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| Protein GI | 258404316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0202572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGTC TGTGGCACAT ACTCCGCCCG GGACCGCTGA CCAGACGCCG CTGGGCCGCG
TTCAAGACCA ATAAACGCGG CTACTGGTCC ATGTGGCTCT TTCTGCTGCT CTTCCTGGCC
TCTCTGGGGG CCGAAGGCAT CGCCAACGAC AAGCCGTTGC TCGTGTGGTT CAAAGGTCAG
ATGTATGCCC CGGTCATCCG CTCCTATCCG GAAACCACTT TTGGCGGGGT CTTTCCTTCG
GAAACCGATT ACCGCGACCC CTTTGTCCAG GAACTCATTG AGGACAACGG CTGGATGCTC
TGGCCACCTG TGCGGTACAG TTACGACACC ATCAATTACG ACCTCGACCA GCCGGCCCCC
TCCCCGCCGA GCACAGAAAA TTGGCTGGGG ACGGACGATC ACGGCCGGGA TGTCCTGGCC
CGGGTCATTT ACGGATTTCG GGTTTCGGTC CTGTTTGGCC TTGTATTGAC CGTATTGAGT
TCACTTGTCG GAGTGATGGT AGGAGCCCTG CAGGGCTACT TCGGGGGCAG GGTGGATATA
CTGGGGCAAC GATTTCTGGA GATCTGGTCC GGTTTGCCGG TCCTTTTTGT GCTCATCATC
CTCTCGAGCT TTGTACAGCC AAGCTTCTGG TGGATTCTGG GCATCATGCT CCTGTTCAGC
TGGATGCCCT TGGTGGACCT TGTTCGGGCG GAATTCCTGC GGGCGCGCAA CATGGAGTTC
GTCCTTGCCG CCCGGGCCCT GGGCGTGGGG CACGCCATGA TCATGGCCAA ACATATCCTT
CCCAACGCCA TGGTCGCGAC CATGACGTTT CTGCCCTTCC TGCTCAACGG ATCTATTACC
ACACTGACGT CACTGGATTT TCTCGGTTTC GGGTTGCCGG CCGGCTCCGC TTCGCTGGGC
GAACTCCTTG CGCAGGGCAA GGCCAATCTC CATGCCCCCT GGATCGGTAT CTCCAGTTTT
ATGGTCCTGG CCGGCCTTTT GACCCTCCTG GTCTTTATCG GGGAGGGAGC ACGGGACGCC
TTTGACCCGC GCCACACACA ATAA
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| Protein sequence | MHRLWHILRP GPLTRRRWAA FKTNKRGYWS MWLFLLLFLA SLGAEGIAND KPLLVWFKGQ
MYAPVIRSYP ETTFGGVFPS ETDYRDPFVQ ELIEDNGWML WPPVRYSYDT INYDLDQPAP
SPPSTENWLG TDDHGRDVLA RVIYGFRVSV LFGLVLTVLS SLVGVMVGAL QGYFGGRVDI
LGQRFLEIWS GLPVLFVLII LSSFVQPSFW WILGIMLLFS WMPLVDLVRA EFLRARNMEF
VLAARALGVG HAMIMAKHIL PNAMVATMTF LPFLLNGSIT TLTSLDFLGF GLPAGSASLG
ELLAQGKANL HAPWIGISSF MVLAGLLTLL VFIGEGARDA FDPRHTQ
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