Gene Dret_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0170 
Symbol 
ID8417974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp213796 
End bp214905 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content58% 
IMG OID645036735 
Producthypothetical protein 
Protein accessionYP_003197050 
Protein GI258404308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.794251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATC CATCCAGTGA AGAGATCCAG GACCAATTTT CCCAAAACGA TGTCCGGTTG 
GCCGAAGACG CCGAGGCCAT CCGCGAAATG CGGCAACAAA AAGGCCTGGA AGGCCTGGTC
GGCGGTTTGG AAGGGGTCAT CATCAACACC GAACCGCAGA TGCACGAACG GGCGGTGGCT
GAACTGTTGC GCACCACCGG CATGCAGGCC GGGGAATGCT TTGCTGAGGC CACTCGGCGG
ATCAGCCGTC TGCAGGCGGC AAACTCCCCT GATCTGATCC TGCAGACCAG ACTCCAGGGG
GACAATCCGT TTTGGGACCT GAACATGAAC CCCAAATCCC GGTTTTTGCC CAATACCAGG
CTGGAAACGT TTGTCTTTCG CACCGAAGAC CTTGCCGAAT ATGTCCGGTT GCAGCGCGAC
CGGGGCGTCG CCTTCATGAC CGAAGAGATC CAGCAATACC CGGATTACGA CTTTATCCAG
ACCAGGCCCT CGCGGTTCAC GAACAACTCC TTGGGTTTTA TCCAATGGAA AAACCCGGGT
GGCAGCCTGG CTGCAGCACA GGCCGAGCCA GCCGCAGCAC TTCCGGAGAA ACCGGCCTTG
GCCCATTTGG ACAATATCGG GCGACTGGAC CACTGCGCCA CCCGAGTCAC GGCGGCAGAA
CGGGACCAGG CCATTCTGGA ATTCATGGAG TTGACCAACT ACAATTTCGA CTTCGCCATC
TACGTCGATT CCTTGAACTC CATCACCAAT GTGGCCCGCT TGTCGGATAC CGACTTCGCC
ATGGTCTTCA CTTCGGGCAT TGCCGCTGCC ACCGGACCGG AAACAGCCGG CCCGACGGAG
CAGTTCATCG TCAACTACGG GCGCCGGGTG CACCACATGG CCTTTGCCAC TGACAATATC
GACGCCACGT ATGACGCCCT GGAGCGCGAC GGCATGCGCT TCCTGGTCGA ACTGGTCGGC
TCCGAGGAGG AAGGCCTGCA GCAAACATTC ACCATGCCGT CGAAATACAC CCTGCTGGTC
AACGAATACA TCCATCGCTA CGGGGACTTT GACGGCTTTT TCACTAAATC GAACGTGACC
ACGCTCACCG AAGCCACCGG CCGGCAATAG
 
Protein sequence
MQHPSSEEIQ DQFSQNDVRL AEDAEAIREM RQQKGLEGLV GGLEGVIINT EPQMHERAVA 
ELLRTTGMQA GECFAEATRR ISRLQAANSP DLILQTRLQG DNPFWDLNMN PKSRFLPNTR
LETFVFRTED LAEYVRLQRD RGVAFMTEEI QQYPDYDFIQ TRPSRFTNNS LGFIQWKNPG
GSLAAAQAEP AAALPEKPAL AHLDNIGRLD HCATRVTAAE RDQAILEFME LTNYNFDFAI
YVDSLNSITN VARLSDTDFA MVFTSGIAAA TGPETAGPTE QFIVNYGRRV HHMAFATDNI
DATYDALERD GMRFLVELVG SEEEGLQQTF TMPSKYTLLV NEYIHRYGDF DGFFTKSNVT
TLTEATGRQ