Gene Dret_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0141 
Symbol 
ID8417945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp181968 
End bp182369 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content56% 
IMG OID645036706 
Productferric uptake regulator, Fur family 
Protein accessionYP_003197021 
Protein GI258404279 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.896296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.23625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA TACCCGAACT TCGCATGACC CGACAACGTC AAGTCATCCT TGACGAACTC 
CGCTCTGTGA CCACCCACCC CACGGCCGAT GAAGTCTACG ACATGGTCCG CAAAATTCTT
CCCCGGATCA GCCTGGGGAC GGTCTACCGC AACCTCGAAC TCATGCATGA GGCCGGCATG
GTGATGAAGT TGGAGACCGC CGGGATGCAA AAGCGTTTCG ACGGCAATCC AGCGCCCCAT
TACCATATCC GCTGCATCAA TTGCGGCATT GTCCGTGATC TGGAGCTTGA AGACAAAGGA
CACGACCTTG AGTCCACGCT GAAAACCGAT TTCAAGGTCT TGGGCCACCG CCTTGAATTC
TACGGCCTGT GCCCGGCCTG CCAAAGCCCG GTCGAGCATT GA
 
Protein sequence
MTHIPELRMT RQRQVILDEL RSVTTHPTAD EVYDMVRKIL PRISLGTVYR NLELMHEAGM 
VMKLETAGMQ KRFDGNPAPH YHIRCINCGI VRDLELEDKG HDLESTLKTD FKVLGHRLEF
YGLCPACQSP VEH